Tk11978, Tk11978 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11978
Unique NameTk11978
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length1314
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 666..693
NoneNo IPR availableGENE3D1.20.1740.10coord: 849..1305
e-value: 1.8E-82
score: 279.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 812..835
NoneNo IPR availablePANTHERPTHR11785AMINO ACID TRANSPORTERcoord: 831..1312
NoneNo IPR availablePANTHERPTHR11785:SF240GH08870Pcoord: 831..1312
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 886..908
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 875..885
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1229..1239
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1003..1025
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 973..991
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1261..1265
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1108..1126
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1205..1209
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 935..961
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1085..1107
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1148..1183
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1210..1228
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1026..1044
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1266..1284
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1285..1314
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1240..1260
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 854..874
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1184..1204
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 909..934
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1065..1084
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1045..1064
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1127..1147
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 992..1002
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 962..972
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..853
NoneNo IPR availableTMHMMTMhelixcoord: 1045..1064
NoneNo IPR availableTMHMMTMhelixcoord: 889..911
NoneNo IPR availableTMHMMTMhelixcoord: 921..938
NoneNo IPR availableTMHMMTMhelixcoord: 1266..1284
NoneNo IPR availableTMHMMTMhelixcoord: 854..876
NoneNo IPR availableTMHMMTMhelixcoord: 1209..1226
NoneNo IPR availableTMHMMTMhelixcoord: 1003..1025
NoneNo IPR availableTMHMMTMhelixcoord: 1183..1205
NoneNo IPR availableTMHMMTMhelixcoord: 1239..1261
NoneNo IPR availableTMHMMTMhelixcoord: 972..991
NoneNo IPR availableTMHMMTMhelixcoord: 1085..1107
NoneNo IPR availableTMHMMTMhelixcoord: 1127..1149
NoneNo IPR availableTMHMMTMhelixcoord: 940..962
IPR012935Zinc finger, C3HC-likePFAMPF07967zf-C3HCcoord: 111..233
e-value: 3.4E-19
score: 69.0
IPR013909Nuclear-interacting partner of ALK/Rsm1-likePFAMPF08600Rsm1coord: 269..309
e-value: 1.5E-5
score: 25.0
IPR002293Amino acid/polyamine transporter IPFAMPF13520AA_permease_2coord: 854..1261
e-value: 4.3E-59
score: 200.3

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1489_size38734-snap-gene-0.9-mRNA-1maker-scaffold1489_size38734-snap-gene-0.9-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11978 ID=Tk11978|Name=Tk11978|organism=Tigriopus kingsejongensis|type=polypeptide|length=1314bp
MATPVEFGALKPLSGAHSSSTGKIGDSDPVEAASGLEAASGPMPQAASTP
VPLAGSRRKLTDEADSSAGEAVRDRSRRVLPGIRDLLDSSLTSSPGKRAR
TEAHGEDPAADRAAFDRRLATFGPQAWSAVNPVTPLECAGRGWAVIERDV
LKCSACQAHLYGKLASPAEPSVYRRSVDGLREKLASAHHKYCFWSQLAVP
AAYLNPFQETPHLLEMVGAQVQANLRHASQLPKFSTRSLGLLWPKSLREY
FSGRLASEPTSDAPALASAAIMALCGWQVTESVHVPVYRCLICQRKCGSW
LYATLADTESPPPELFGDDEKAFQDELMSEVVNELVLPLARETLEDGGPS
TQGIQSECSDTPAQFTFSQPLALFTSASEETSRTSVINDVAETMMERVFS
KPLGLGSGPPSRAMSEVSMDVNYDDSSVHELNLSKTKSSVEYEADCSESS
VPPTSTLSGEPVGHASTTQGSTQPRRLNLREDAVMEATSSGDNESASANP
STLPTIDQGNLAERVFGSDILRTVAKQASALPKTPLKAGQEATDVSMMAN
FDPASPDPASEAKFGAPESKEADLVAEIGSERDEEDELVIDDAGESSEAP
VLSGNEEERADEDESRSCGSSYPAFSQNSGSEPSFRAVKGVARNEPDLDS
RSMPEEESQPTTILEENDGDEDVEEEEELLEEEEDEEDCEEDGKDSSSVD
LDNAEADRDDSNDTNGSGSHEADSQPSRYSRQRGKGDMPDVVTLSSDDDD
EELRGGGSPMSDLQLSPDSSPIKQVDPESSCPNLDGHFDLQPDSQVFGFG
QSGVDSITMAVPDPKGESESRPMLGSPETDKSAPTADEIAAKAEDGGMHM
KREIGLLEGVAIILGIIIGSGIFISPKGVLRETGSVGMSLVVWSACGFLS
MIGALCYAELGTSIPRSGSDYAYISEAFGPMPAFLYLWAANVIFVPTTNA
IMGLTVASYLAQPLFPDCDVPLLAMQLIAALCICFLTWLNCHSMKFTTSL
QNVFMFTKLAALFIVIVVGMVALAKGGYSKFDNAFANTETEPGKIAVSFY
SGIYSYAGWNYLNFMTEELRDPYQSVNDRQNLPRAIFISIPLVTVAYVLA
NIAYLAVLDPVSMMSSNAVAVTFADKTMGFGSLLIPALVAVSAFGGLSCH
IMTSSRLCFVGARQGHFPDCLSMITVDSFTPKPALVFLCILSLFYLGAGD
IYSLIDYASFVESMFILVSLTGLLYLRWKRPDMPRPIKVNIIVPITFLFI
CTFLVFMPLYVRPMEVGMGLLITASGIPVYLIGVRVTNKPAWFQNSLGLI
TKQSQKLFMAVKED
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012935Znf_C3HC-like
IPR013909NIPA/Rsm1
IPR002293AA/rel_permease1
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0022857transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
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