Tk12013, Tk12013 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12013
Unique NameTk12013
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length396
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029765Diphosphomevalonate decarboxylaseTIGRFAMTIGR01240TIGR01240coord: 9..318
e-value: 4.1E-96
score: 319.6
IPR006204GHMP kinase N-terminal domainPFAMPF00288GHMP_kinases_Ncoord: 106..154
e-value: 5.6E-7
score: 29.6
IPR005935Diphosphomevalonate/phosphomevalonate decarboxylasePIRSFPIRSF015950Mev_P_decrbxcoord: 2..388
e-value: 3.3E-117
score: 389.2
IPR036554GHMP kinase, C-terminal domain superfamilyGENE3D3.30.70.890coord: 180..380
e-value: 1.4E-157
score: 526.1
IPR036554GHMP kinase, C-terminal domain superfamilySUPERFAMILY55060GHMP Kinase, C-terminal domaincoord: 187..392
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 8..179
e-value: 1.4E-157
score: 526.1
NoneNo IPR availablePANTHERPTHR10977DIPHOSPHOMEVALONATE DECARBOXYLASEcoord: 6..395
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 7..175

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1285_size50744-snap-gene-0.11-mRNA-1maker-scaffold1285_size50744-snap-gene-0.11-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12013 ID=Tk12013|Name=Tk12013|organism=Tigriopus kingsejongensis|type=polypeptide|length=396bp
LSRNMEVVTCTAPVNIAVIKYWGKRDESLILPINDSLSATLCSSQMHAKT
TVAISSDFKSDRIWLNGTEETMDNPRLVNCLREVRRRAREAGNATKSLDW
KVHVCSANNFPTAAGLASSAAGYACLVYALCKLYKVEGDLSELARQGSGS
ACRSVLGGFVRWRMGSQPEGTDSLAETVVGPEHWPDMRIIILVANDGCKK
VPSSIGMRRSVETSDLLKLRAEKCVPKRIEAMEAAIRAKDFEAFARHTIQ
DSNQMHATCLDTYPPCVYMNSTSHQVVDLVHQINDFYGKSVLAYTFDAGP
NACLFLLKDSVPCLVRLIRHFFPTSNVEHNQDPFKNIQFDVDIESGSEEF
DKMKKSLSLEVTRDGIKFAIYTKVGKGPELLTETSGHLLDSNGDPK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005935Mev_decarb
IPR006204GHMP_kinase_N_dom
IPR036554GHMP_kinase_C_sf
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR020568Ribosomal_S5_D2-typ_fold
Vocabulary: Biological Process
TermDefinition
GO:0019287isopentenyl diphosphate biosynthetic process, mevalonate pathway
GO:0008299isoprenoid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004163diphosphomevalonate decarboxylase activity
GO:0005524ATP binding
GO:0016831carboxy-lyase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
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