|
|
Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR036910 | High mobility group box domain superfamily | GENE3D | 1.10.30.10 | | coord: 27..96
e-value: 2.6E-6
score: 29.6 |
| IPR036910 | High mobility group box domain superfamily | SUPERFAMILY | 47095 | HMG-box | coord: 38..90 |
| IPR024970 | Maelstrom domain | PFAM | PF13017 | Maelstrom | coord: 176..405
e-value: 1.9E-28
score: 99.5 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..32 |
| None | No IPR available | CDD | cd00084 | HMG-box | coord: 36..89
e-value: 0.00365108
score: 33.7464 |
| IPR039259 | Protein maelstrom | PANTHER | PTHR21358 | FAMILY NOT NAMED | coord: 282..405
coord: 41..246 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk12019 ID=Tk12019|Name=Tk12019|organism=Tigriopus kingsejongensis|type=polypeptide|length=518bp
MTPTTWRNSHGTIGGRLQYGRTPLYPSGKKRGTMGKTKMVPFALFCREKE
QTCPQFRGQSMAQLSRSCAAYWEALDMADKATYKRRAQEMNNAPGRGGGA
VSEDHTPPARMGRFDSLGRSLVALEQAQAIRDYRVGLAEHDIASRTRGPR
YLTERWIFMETTVWLDEPTRMDLIGYRPCEIALVELSLAGGVTRHYNQLV
DPGSLPLGFKGAMKVYSDKFHHVWLDHPDLSDDYGSIVERLRQILAVRPE
EKPARAGGSCSEDHPDLAEWIDTDERQRLAREHNFLPIFVASENYEATRG
AIEWLQKAAGTKLHFECYDLSRLFTHLMNNQNEHPHLRVPSMAVAQLHLN
RDVLLYTPGMPCPFHEVEENFFCAGAFVARRAFLFLDLVCQALDIPKHEG
DHFPHGLTQLDASLDQGGDAFLEAYLTNLSMEDVSVHKTRFRSIQRVVPP
DKHILSDFIDFDGMEVATRSELDMEAYPVDQDPDGSFISQVPLPLFDLAS
LDFEDQPTKTKQNNAVER back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0060964 | regulation of gene silencing by miRNA |
|
