Tk12038, Tk12038 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12038
Unique NameTk12038
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length730
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035974Rap/Ran-GAP superfamilyGENE3D3.40.50.11210coord: 1..208
e-value: 6.4E-69
score: 233.2
IPR035974Rap/Ran-GAP superfamilySUPERFAMILY111347Rap/Ran-GAPcoord: 2..237
NoneNo IPR availableGENE3D3.30.710.10coord: 448..574
e-value: 1.3E-9
score: 40.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 413..441
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..449
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 390..412
NoneNo IPR availablePANTHERPTHR15711RAP GTPASE-ACTIVATING PROTEINcoord: 621..715
NoneNo IPR availablePANTHERPTHR15711:SF25RADISH, ISOFORM Icoord: 1..282
NoneNo IPR availablePANTHERPTHR15711RAP GTPASE-ACTIVATING PROTEINcoord: 295..613
NoneNo IPR availablePANTHERPTHR15711:SF25RADISH, ISOFORM Icoord: 621..715
NoneNo IPR availablePANTHERPTHR15711:SF25RADISH, ISOFORM Icoord: 295..613
NoneNo IPR availablePANTHERPTHR15711RAP GTPASE-ACTIVATING PROTEINcoord: 1..282
IPR000331Rap GTPase activating protein domainPFAMPF02145Rap_GAPcoord: 18..220
e-value: 1.3E-61
score: 207.3
IPR000331Rap GTPase activating protein domainPROSITEPS50085RAPGAPcoord: 1..227
score: 63.418
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 465..526
coord: 296..331

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold90_size386344-snap-gene-0.18-mRNA-1maker-scaffold90_size386344-snap-gene-0.18-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12038 ID=Tk12038|Name=Tk12038|organism=Tigriopus kingsejongensis|type=polypeptide|length=730bp
LKVGVIYVKENQYTEEEILANNDHSDNFDEFLTILGEKVRLRGFDRYKGG
LDTVHDLTGHHSVCTHWRSIEVMFHVSTLLPFEQNDPQKLQRKRHIGNDI
VCVVFLEADNTQFSPSCIKSHFLHTFIVVRCSPKIKFKPARYEVRNCQAE
ASRGCNAEARIFQVSVVTRDEVGAYKPYLWEQSTFNKGPMFREWMLTKIV
NAERASYSAPKFARMQERTRSQMLEDLVANLQNHAETGQIPKPYRRGSWR
PIGHMRPSSPLLDSVRDLFEGQDQMAKDFAKAFFLPPNGSEPFPNLFDIT
FLVGQGKNKSKLFGVRAILGVRSRVFQEILYGISTGFGSPQVPVAELLAR
AVPSLHGTGGMQSFGRGKSSNFLQVPEIEGPRPKSVPNSPSIPRAFTNLR
NQLSTAWSSHTTKKKEQQNRLTTDDKKRWASSQDCTKDQKDSGKGSNIPQ
LSVPRLSVCADAQKVDRSKLAQTEFPIIEFDGETFRILLTYLHTGSCPLS
CLNIPGLICSAEHYDLPELLQACFHHAKQFIRVNVCCQMLCSLENYYWRY
TSASELVNMILAFIETRSLAVFQDEHFLQLSESMVQMIMNRNLEVSELAK
YESRVQSTSHTVSNQVTLSLIPRFETMLKWARHRVHSKSFTSVVDARIEF
RCCMDRLTRDLKLYRIAPQDLIKIVLPSKAIRNDKILDTLTVQATSGMYR
VQDSYLEACQRLQRQESRVSEWESFDYAFS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035974Rap/Ran-GAP_sf
IPR000331Rap_GAP_dom
IPR011333SKP1/BTB/POZ_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005096GTPase activator activity
Vocabulary: Biological Process
TermDefinition
GO:0051056regulation of small GTPase mediated signal transduction
Add to Basket