Tk12057, Tk12057 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12057
Unique NameTk12057
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length573
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000644CBS domainSMARTSM00116cbs_1coord: 498..556
e-value: 73.0
score: 2.0
coord: 433..481
e-value: 2.7E-5
score: 33.6
IPR000644CBS domainPFAMPF00571CBScoord: 432..480
e-value: 7.1E-7
score: 29.5
IPR000644CBS domainPROSITEPS51371CBScoord: 494..561
score: 7.074
IPR000644CBS domainPROSITEPS51371CBScoord: 426..486
score: 10.756
NoneNo IPR availableGENE3D3.10.580.10coord: 412..561
e-value: 3.2E-51
score: 175.1
NoneNo IPR availableGENE3D3.40.50.1100coord: 131..244
e-value: 1.6E-134
score: 449.8
NoneNo IPR availableGENE3D3.40.50.1100coord: 99..130
e-value: 1.6E-134
score: 449.8
coord: 245..399
e-value: 1.6E-134
score: 449.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..93
NoneNo IPR availablePANTHERPTHR10314:SF134CYSTATHIONINE BETA-SYNTHASEcoord: 74..560
NoneNo IPR availablePANTHERPTHR10314SER/THR DEHYDRATASE, TRP SYNTHASEcoord: 74..560
NoneNo IPR availableCDDcd04608CBS_pair_PALP_assoccoord: 431..555
e-value: 2.57576E-41
score: 143.234
NoneNo IPR availableCDDcd01561CBS_likecoord: 100..398
e-value: 7.50216E-144
score: 414.989
NoneNo IPR availableSUPERFAMILY54631CBS-domain paircoord: 425..555
IPR001926Pyridoxal-phosphate dependent enzymePFAMPF00291PALPcoord: 98..391
e-value: 6.0E-65
score: 219.5
IPR005857Cystathionine beta-synthaseTIGRFAMTIGR01137TIGR01137coord: 91..555
e-value: 2.7E-197
score: 653.9
IPR001216Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment sitePROSITEPS00901CYS_SYNTHASEcoord: 123..141
IPR036052Tryptophan synthase beta subunit-like PLP-dependent enzymeSUPERFAMILY53686Tryptophan synthase beta subunit-like PLP-dependent enzymescoord: 71..408

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold2498_size15023-processed-gene-0.2-mRNA-1snap_masked-scaffold2498_size15023-processed-gene-0.2-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12057 ID=Tk12057|Name=Tk12057|organism=Tigriopus kingsejongensis|type=polypeptide|length=573bp
LSTQPRRSYISTSRLVQDIDMAPGQNSDFPPIAPIPATRKKSFSSGSKMV
SHECPVDFIRPDLPSRCTWALGKPQSDSPHTRDSVKPTPKIMPTVLHNIG
NTPLIRINKIAESEGVKCQLLAKCEFFNAGGSVKDRIALRMIEDAEAAGI
LKPGDTIIEPTSGNTGIGLAMGAAVKGYRCIIVLPEKMSTEKVDTLRALG
AEIVRTPTSATFDSPESHISVAQRLCNEIPNAIILDQYRNPGNPLAHYDT
TAEEIIYQCDGKVDMIVMSAGTGGTATGIGRKIKEKCPKCQVVLVDPEGS
ILAQPESLNKTEVTYYDVEGTGYDFIPTVLDRSVADLWKKSNDADSFKMA
RRLMREEGLLCGGSSGSAMAIAVEMAKTLKPDQKCVVILPDGVRNYMSKF
LDDKWLAERDIIQLQQEKLWWSDLKVSSLELSAPLSVRPTLKVDDTIKIM
NKEGYDQLPVIDEKGQICGVATLGSLKSKLLRGKVEPFDPVEKATYTTFK
KVTLDTTLEKLDRILDKEHFALVVHSQRLYTSDEAVETKEVIVGIVTDID
LLHHVTKREDLASGSAQSQSEGD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000644CBS_dom
IPR001926PLP-dep
IPR005857Cysta_beta_synth
IPR001216P-phosphate_BS
IPR036052Trypto_synt_PLP_dependent
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0019343cysteine biosynthetic process via cystathionine
GO:0006535cysteine biosynthetic process from serine
Vocabulary: Molecular Function
TermDefinition
GO:0004122cystathionine beta-synthase activity
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