Tk12068, Tk12068 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12068
Unique NameTk12068
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length505
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033911Methioninyl-tRNA synthetase core domainPRINTSPR01041TRNASYNTHMETcoord: 345..356
score: 53.7
coord: 253..268
score: 56.94
coord: 228..239
score: 68.52
coord: 7..20
score: 52.12
coord: 87..98
score: 54.01
coord: 39..53
score: 47.41
IPR033911Methioninyl-tRNA synthetase core domainCDDcd00814MetRS_corecoord: 4..333
e-value: 6.03072E-136
score: 393.436
NoneNo IPR availableGENE3D2.170.220.10coord: 116..230
e-value: 7.1E-130
score: 434.9
NoneNo IPR availableGENE3D1.10.730.10coord: 335..504
e-value: 7.9E-33
score: 115.5
NoneNo IPR availablePANTHERPTHR43326:SF1METHIONINE--TRNA LIGASE, MITOCHONDRIALcoord: 2..476
NoneNo IPR availablePANTHERPTHR43326FAMILY NOT NAMEDcoord: 2..476
NoneNo IPR availableCDDcd07957Anticodon_Ia_Metcoord: 343..470
e-value: 1.39734E-27
score: 104.879
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 2..344
IPR015413Methionyl/Leucyl tRNA synthetasePFAMPF09334tRNA-synt_1gcoord: 5..357
e-value: 1.9E-97
score: 326.4
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 231..330
e-value: 7.1E-130
score: 434.9
coord: 5..115
e-value: 7.1E-130
score: 434.9
IPR013155Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-bindingPFAMPF08264Anticodon_1coord: 388..470
e-value: 5.8E-6
score: 26.2
IPR014758Methionyl-tRNA synthetaseTIGRFAMTIGR00398TIGR00398coord: 5..479
e-value: 4.4E-130
score: 432.8
IPR009080Aminoacyl-tRNA synthetase, class Ia, anticodon-bindingSUPERFAMILY47323Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasescoord: 346..478

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold60_size442463-snap-gene-0.25-mRNA-1maker-scaffold60_size442463-snap-gene-0.25-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12068 ID=Tk12068|Name=Tk12068|organism=Tigriopus kingsejongensis|type=polypeptide|length=505bp
MKRTFFITTPIYYASGPPHIGHLYTTTLADAYHRFQKIQGHNSILSTGTD
EHGYKIQKKAWEKQMKPKLYVDQISKQYSDLFTQSRIDFTDFIRTTDPRH
CEKVQELWRHMSERGLIHKKQHQGWYCVPDETFVPEEQTESNERDERISK
ESGHPVEWTQEDNYVFNIADFQDQIRDWLHQQSVITPKLFLSSLDSLLAV
KIPELSLSRPTSRVSWGIPVPDDPSQSIYVWFDALLNYLTVGESHGTWPA
DIHVVGKDILRFHAIYLPAFLMANGLDLPKRLMCHSHWTVGGKKMSKSLG
NIVDPHEAMAQVGAEGLRYYLLRQGVPGTDNNFDQDKVLHYFNHELADTL
GNLLSRSGGKKVNKAQVRQPFDPDLLQSPLGRSIRDMWHQMGDQVGHSYE
DFNFYQGITTIMDLLRNTNGFFDEQKPWTIKDESPEKDLTVQVSLESLRR
AGILLQPIIPDISNALLDKLNVQDRAWSALASPDSEPKPLNMGQSVLVQK
IYTQS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033911MetRS_core
IPR015413Methionyl/Leucyl_tRNA_Synth
IPR014729Rossmann-like_a/b/a_fold
IPR013155M/V/L/I-tRNA-synth_anticd-bd
IPR014758Met-tRNA_synth
IPR009080tRNAsynth_Ia_anticodon-bd
Vocabulary: Biological Process
TermDefinition
GO:0006431methionyl-tRNA aminoacylation
GO:0006418tRNA aminoacylation for protein translation
Vocabulary: Molecular Function
TermDefinition
GO:0004825methionine-tRNA ligase activity
GO:0005524ATP binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Add to Basket