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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 42..69 |
| None | No IPR available | GENE3D | 1.10.287.160 | | coord: 1..63
e-value: 5.1E-13
score: 50.8 |
| None | No IPR available | GENE3D | 2.30.42.10 | | coord: 471..579
e-value: 9.5E-33
score: 114.3 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 560..674 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 658..674 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 573..635 |
| None | No IPR available | PANTHER | PTHR23031 | FAMILY NOT NAMED | coord: 1..610 |
| None | No IPR available | PANTHER | PTHR23031:SF6 | RHOPHILIN-1 | coord: 1..610 |
| None | No IPR available | CDD | cd11633 | HR1_Rhophilin-1 | coord: 1..68
e-value: 3.45415E-38
score: 134.191 |
| None | No IPR available | CDD | cd09244 | BRO1_Rhophilin | coord: 77..466
e-value: 0.0
score: 601.639 |
| None | No IPR available | CDD | cd00992 | PDZ_signaling | coord: 484..561
e-value: 4.62418E-21
score: 85.311 |
| IPR001478 | PDZ domain | SMART | SM00228 | pdz_new | coord: 495..564
e-value: 1.3E-15
score: 67.9 |
| IPR001478 | PDZ domain | PFAM | PF00595 | PDZ | coord: 487..560
e-value: 6.1E-12
score: 45.6 |
| IPR001478 | PDZ domain | PROSITE | PS50106 | PDZ | coord: 486..564
score: 16.003 |
| IPR011072 | HR1 rho-binding domain | SMART | SM00742 | hr1_7 | coord: 3..66
e-value: 6.4E-13
score: 58.9 |
| IPR011072 | HR1 rho-binding domain | PFAM | PF02185 | HR1 | coord: 4..66
e-value: 5.7E-17
score: 61.5 |
| IPR004328 | BRO1 domain | SMART | SM01041 | BRO1_2 | coord: 76..493
e-value: 8.7E-132
score: 453.8 |
| IPR004328 | BRO1 domain | PFAM | PF03097 | BRO1 | coord: 77..484
e-value: 5.5E-90
score: 301.9 |
| IPR004328 | BRO1 domain | PROSITE | PS51180 | BRO1 | coord: 76..472
score: 49.249 |
| IPR038499 | BRO1 domain superfamily | GENE3D | 1.25.40.280 | | coord: 68..353
e-value: 5.0E-84
score: 284.2 |
| IPR036034 | PDZ superfamily | SUPERFAMILY | 50156 | PDZ domain-like | coord: 473..564 |
| IPR036274 | HR1 repeat superfamily | SUPERFAMILY | 46585 | HR1 repeat | coord: 1..62 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk12079 ID=Tk12079|Name=Tk12079|organism=Tigriopus kingsejongensis|type=polypeptide|length=674bp
LQSKRSKLNMEINKELMLRSGAENLFKATTNKKLKETVALELSFVNSNLQ
LLKEQLAELNSSVELYQNAAKDSEIPMIPLGLKETKEIDFREPFKDFILE
HYSEDGIDYENAIAEFMDVRQAMRTPTRDQNGIALLFEHFNQLYYVERRF
FPPDRSLGIFFEWYDSLTGVPSCQRTVAFEKASVLFNIAALYTQIGTRQD
RHSQSGLDLAVDNFLRAAGTFQYIHENFTNAPSMDLNPDTLELMVHLMCA
QARECLFEKAELTLKAKTSNDIETCLILGQEAAHVSEVYFKVHGIISTPP
VKDYVPYSWISLTQVKREHYKALAHYFVAVGLLDHTEEKFSQRASELLQF
LHDDDDDDKGVGCIEIRVPKTTDERRYLGKAHLREALLLHEEAMRVNRMC
RELRKKNVLQSLLRDTHDRSLNKYASIDEEDDFQEVLDPPPVLPSTQYQL
SLAFPDLSQHKVQDLFADLGPVAIFNAKHYWSAPRSIKLRKREHEGYGFS
VRGDSPVIIAGVDHRSLAEAGGMKEGDYIVGINENDVKWSPHDEVVGLIK
SSGNALKLKVVTPMDGKEKTPSKMIPSCSTSHSNRTRGSISPTSTSSGVS
GMGTYSSSHGGDSSSPASSVTSGSTRSTGNSKEKKPWNIFSHGGKKASGS
GSGSTGGKEKTKMRDDFDDNVILR back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007165 | signal transduction |
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