Tk12101, Tk12101 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12101
Unique NameTk12101
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length376
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018149Lysyl-tRNA synthetase, class II, C-terminalPRINTSPR00982TRNASYNTHLYScoord: 232..248
score: 53.16
coord: 261..274
score: 70.63
coord: 216..226
score: 63.64
coord: 279..296
score: 77.57
NoneNo IPR availableGENE3D2.40.50.140coord: 37..172
e-value: 8.1E-36
score: 125.0
NoneNo IPR availableGENE3D3.30.930.10coord: 176..375
e-value: 1.6E-62
score: 213.7
NoneNo IPR availablePANTHERPTHR42918FAMILY NOT NAMEDcoord: 27..372
NoneNo IPR availablePANTHERPTHR42918:SF3LYSINE--TRNA LIGASEcoord: 27..372
NoneNo IPR availableCDDcd04322LysRS_Ncoord: 86..190
e-value: 2.76475E-37
score: 128.364
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 179..360
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-typePFAMPF01336tRNA_anti-codoncoord: 86..163
e-value: 2.3E-10
score: 40.2
IPR004364Aminoacyl-tRNA synthetase, class II (D/K/N)PFAMPF00152tRNA-synt_2coord: 181..357
e-value: 2.2E-43
score: 148.4
IPR006195Aminoacyl-tRNA synthetase, class IIPROSITEPS50862AA_TRNA_LIGASE_IIcoord: 201..342
score: 18.633
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 36..171

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold747_size103044-snap-gene-0.16-mRNA-1maker-scaffold747_size103044-snap-gene-0.16-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12101 ID=Tk12101|Name=Tk12101|organism=Tigriopus kingsejongensis|type=polypeptide|length=376bp
MFRGQARLCSVVRGCWGPRRTLADLSDASESQKLSTKDYAEYRKRQLAHL
QDLYPHQFTNSHTIRAFDHEFAHLTETQSLPEVSSSLAGRINSIRLVGKK
LVFLDIHQLDHKVQVKIRREDFEGNFDDEVKILRRGDILAVTGFPARTQA
GELSLCAKSVKLLAPCLKMMPNKQVDLENPDKRFRKRHVDFLADPDKKAI
FHTRAAVIRTLRSHLDARDFLEVETPILATQAGGASAEPFRTRHKELAMD
MCLRIAPELYLKQLVVGGFDRVYEIGKQFRNEGIDATHNPEFTTCEVYMA
YADYSDMMRLTGRLLREITAQVVGSELKVPYVMKGRPVVLDFKSKFNRLD
YFSGVEAALNRSLPGAEEVNEDGEDT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018149Lys-tRNA-synth_II_C
IPR004365NA-bd_OB_tRNA
IPR004364aa-tRNA-synt_II
IPR006195aa-tRNA-synth_II
IPR012340NA-bd_OB-fold
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006430lysyl-tRNA aminoacylation
GO:0006418tRNA aminoacylation for protein translation
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004824lysine-tRNA ligase activity
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0004812aminoacyl-tRNA ligase activity
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