|
Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR001030 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain | PRINTS | PR00415 | ACONITASE | coord: 490..501 score: 62.07 coord: 267..282 score: 51.4 coord: 343..356 score: 57.58 coord: 224..232 score: 46.94 coord: 425..439 score: 41.36 coord: 552..565 score: 55.25 coord: 329..342 score: 58.16 coord: 253..266 score: 56.27 coord: 200..213 score: 39.21 |
IPR001030 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain | PFAM | PF00330 | Aconitase | coord: 121..621 e-value: 2.2E-178 score: 593.9 |
IPR000573 | Aconitase A/isopropylmalate dehydratase small subunit, swivel domain | PFAM | PF00694 | Aconitase_C | coord: 750..875 e-value: 4.6E-43 score: 146.6 |
IPR015931 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 | GENE3D | 3.30.499.10 | | coord: 426..649 e-value: 6.1E-107 score: 357.8 |
IPR006249 | Aconitase/Iron-responsive element-binding protein 2 | TIGRFAM | TIGR01341 | TIGR01341 | coord: 85..945 e-value: 0.0 score: 1310.4 |
IPR006249 | Aconitase/Iron-responsive element-binding protein 2 | PANTHER | PTHR11670 | ACONITASE | coord: 58..944 |
IPR015928 | Aconitase/3-isopropylmalate dehydratase, swivel | GENE3D | 3.20.19.10 | | coord: 712..946 e-value: 2.9E-104 score: 349.3 |
None | No IPR available | GENE3D | 1.10.1440.20 | | coord: 650..711 e-value: 1.3E-29 score: 103.8 |
None | No IPR available | GENE3D | 3.30.499.20 | | coord: 57..425 e-value: 2.2E-171 score: 571.1 |
None | No IPR available | CDD | cd01580 | AcnA_IRP_Swivel | coord: 727..894 e-value: 1.36531E-104 score: 319.992 |
None | No IPR available | CDD | cd01586 | AcnA_IRP | coord: 139..623 e-value: 0.0 score: 763.385 |
None | No IPR available | SUPERFAMILY | 52016 | LeuD/IlvD-like | coord: 690..945 |
IPR029784 | Iron regulatory protein 1 | PANTHER | PTHR11670:SF32 | CYTOPLASMIC ACONITATE HYDRATASE | coord: 58..944 |
IPR018136 | Aconitase family, 4Fe-4S cluster binding site | PROSITE | PS00450 | ACONITASE_1 | coord: 486..502 |
IPR018136 | Aconitase family, 4Fe-4S cluster binding site | PROSITE | PS01244 | ACONITASE_2 | coord: 552..565 |
IPR036008 | Aconitase, iron-sulfur domain | SUPERFAMILY | 53732 | Aconitase iron-sulfur domain | coord: 86..686 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk12153 ID=Tk12153|Name=Tk12153|organism=Tigriopus kingsejongensis|type=polypeptide|length=946bp MAMDPSEAMAGRVGGLRADTLRDKQCDSASTSSVLTFQLSSVSVLAIKMA PSAPSAPSPFGHLLRDLKVEGHGNLKFFDLASLGPEYGQLPFSIRVLLES AVRNCDNFQVLETDVIKILKWAQNQSVPSGVEVPFRPARVILQDFTGVPA VVDFAAMRDAVQRLGGDPEMINPQCPSDLVIDHSVQVDFVRTPDALSKNE ELEFERNKERFTFLKWGAKAFKNMLIVPPGSGIVHQVNLEYLARVCFTDS DIVYPDSVVGTDSHTTMINGLGVVGWGVGGIEAEAVMLGQPISMVLPKVL GYKISGKMHSLVTSTDVVLTITKHLRQIGVVGKFVEFYGPGVASLSIADR ATIANMCPEYGATVGYFPVDSQSIDYLKQTNRDATKIKAIEAYLNAVGMM RNYSDASQDPTFSEVVELDLASVVPSLSGPKRPHDRVSVSDMKTDFLNCL SANIGFKGYGLPKDKLTTTVPFVLNGKEHVISHGAVLIAAITSCTNTSNP SVMLGAGLMAKKAVEKGLSVAPYIKTSLSPGSGVVTYYLKESGVIPYLDA LGFSIVGYGCMTCIGNSGPLEEPVSEAIKKGDLVCCGVLSGNRNFEGRIH ADTRANYLASPPLVIAYAIAGRVDIDFETEALGQDADGKPVFLRDIWPSR EEIQAVEKKYVIPTMFEEVYSKITTGNDRWNKLEAPEGKLYPWDQNSTYI KSPPFFDGMTKELPAPRKVENALPLLNLADSVTTDHISPAGSIARNSPAA RFLGSKGITPREFNSYGSRRGNDAVMARGTFANIRLVNKFIGQAGPKTLH IPSNEVMDVFDAAEEYKKENRHLVILAGQDYGCGSSRDWAAKGPFLQGVR AVMAESYERIHRSNLVGMGIVPLQYMSGENADSLGLTAKEEFTVHIPADL KPQQTLEVQVSGKKSFKVLARFDTELELTYYRHGGILNYMIRKMIA back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term | Definition |
GO:0003994 | aconitate hydratase activity |
GO:0051539 | 4 iron, 4 sulfur cluster binding |
|