Tk12218, Tk12218 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12218
Unique NameTk12218
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length827
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 602..824
e-value: 2.5E-4
score: -21.7
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 617..798
e-value: 8.4E-15
score: 55.1
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 603..827
score: 13.656
NoneNo IPR availableGENE3D2.40.10.10coord: 722..819
e-value: 2.5E-22
score: 81.6
coord: 606..615
e-value: 2.5E-22
score: 81.6
NoneNo IPR availableGENE3D2.40.10.10coord: 616..721
e-value: 2.5E-22
score: 81.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 461..489
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 379..514
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 425..447
NoneNo IPR availablePANTHERPTHR24258SERINE PROTEASE-RELATEDcoord: 411..798
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..827
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..27
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.695
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00962RIBOSOMAL_S2_1coord: 14..25
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 600..801

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold927_size80360-snap-gene-0.26-mRNA-1maker-scaffold927_size80360-snap-gene-0.26-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12218 ID=Tk12218|Name=Tk12218|organism=Tigriopus kingsejongensis|type=polypeptide|length=827bp
MVGPVSLSGLSLVLMAVLESGVHLGSARKINLGPSVDPGVFVITQVDTCR
GGRGYCVLGFNCNIDKDFVADDLGGHCDGLGRAFNPITSFVCCRENPANF
NVHETAETTTTTSTTSTPPRTVTELVTSIVTELSTVTELVTRIEQVTEIQ
ELTTVQSIIPDATTAPTIVETTPTVTSVPTEWPMLEDETTTKVPADVMSE
LEMTTETTSSVTNTGSVMTPEPITEASGTTDLDALVSSVLDLLVPIKLET
PSEPVQAPPLPLSAVVHNSSEGTTTMDGAMNAAEITTTETLRPGMVIDDP
SLFEDLMEEKNENLRPRIEIADDLVQVIGDFQPQFYNPKTTLDPAPSDTK
GKVDCYAAILLGIDCETKDQTPTTMKEKLKLKEQNSSASDPIMPPNLGHP
EALVSKEPSDVTQDMPDEEGTTEEYSDITTTQDTTDELFNETITTSDIAL
EPERDESLPRPSETSTLADILEETTTASDAGSASKEVTTRADATPEEDLT
PLGIVPEDEDKTKPSHIDLPIELLKTDPTSIPLTSTEATQEIKSAYRRIV
DKPPTPGPECGVLGGKGLLQAFGKVAQGLLPDLVASWVSGQHGGGKNREQ
SEYVGGGVVTSTVIYCWMAAVVAQTAEGRNEFVCTGTLVKQDLVVVSASC
AMELVTRNPSDIKVVVGDSNLNLDLPFGVQVLDVSMIHIHDQYRPYESLV
EHNLGLIHLKVKATLTNTVCLLCLPPSLDTQELPLDSPCSIISYGKIVDN
PIDLPFEVTSKKSIGVLRKSEYVIQDAQRCNITLSPSTVQEGVLCARQIE
DLSPEKERQKREHCNTDVGKKYVEYQG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001254Trypsin_dom
IPR018130Ribosomal_S2_CS
IPR009003Peptidase_S1_PA
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
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