|
|
Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 191..211 |
| None | No IPR available | GENE3D | 1.10.8.270 | | coord: 700..805
e-value: 1.8E-29
score: 103.7 |
| None | No IPR available | GENE3D | 2.30.42.10 | | coord: 501..624
e-value: 3.2E-27
score: 96.6 |
| None | No IPR available | GENE3D | 1.10.472.80 | | coord: 806..954
e-value: 5.3E-31
score: 109.4 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 416..433 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 478..506 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 404..508 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 434..449 |
| None | No IPR available | PANTHER | PTHR22957 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN | coord: 621..947 |
| None | No IPR available | PANTHER | PTHR22957:SF284 | SUBFAMILY NOT NAMED | coord: 621..947 |
| None | No IPR available | CDD | cd00992 | PDZ_signaling | coord: 535..609
e-value: 1.28657E-16
score: 73.3698 |
| IPR000195 | Rab-GTPase-TBC domain | SMART | SM00164 | tbc_4 | coord: 682..899
e-value: 3.9E-54
score: 195.8 |
| IPR000195 | Rab-GTPase-TBC domain | PFAM | PF00566 | RabGAP-TBC | coord: 689..896
e-value: 6.1E-54
score: 182.8 |
| IPR000195 | Rab-GTPase-TBC domain | PROSITE | PS50086 | TBC_RABGAP | coord: 685..876
score: 34.751 |
| IPR001478 | PDZ domain | SMART | SM00228 | pdz_new | coord: 537..613
e-value: 1.2E-15
score: 68.0 |
| IPR001478 | PDZ domain | PFAM | PF00595 | PDZ | coord: 531..609
e-value: 4.1E-13
score: 49.4 |
| IPR001478 | PDZ domain | PROSITE | PS50106 | PDZ | coord: 527..612
score: 17.27 |
| IPR035969 | Rab-GTPase-TBC domain superfamily | SUPERFAMILY | 47923 | Ypt/Rab-GAP domain of gyp1p | coord: 664..836 |
| IPR035969 | Rab-GTPase-TBC domain superfamily | SUPERFAMILY | 47923 | Ypt/Rab-GAP domain of gyp1p | coord: 811..926 |
| IPR036034 | PDZ superfamily | SUPERFAMILY | 50156 | PDZ domain-like | coord: 525..616 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk12222 ID=Tk12222|Name=Tk12222|organism=Tigriopus kingsejongensis|type=polypeptide|length=961bp
LVRKMPPAPISKGTGSLARKWRKLKKRCSSFSSGDVLNGLTRSKSMTEKD
SLGNGEFIHHQHVQLDTDDEDEDIDEGISELNITVATATVDEASLSKFRN
IRDKINQWNFDKKRRASSQGDSNGQGPAVLQRYQWPQQQPQQVHPGGGHS
SSPSPQSSCSGQSRPVMRSSSLKGDLHHQKAQGACRDSNERNEHEGDQDR
VEDEAEDEEEVFVRANPIHTKHSGQVKSAMIVSATNPYCTGSRVPAKLRN
KKRLGTEWSTTPSPSPPISDDSSEGHGPNHSNVSTVSSLSHDQDSGYDGY
CPTVHDKSMISISSSSESTSVTSSLEESPYGNAATVAAGRSASNPKDSTG
LYGRTTTGRSRPQSVYEKQYGPVQHCLASPGFESSGYSQRSQLATVVNLV
KRGDQHASPVRPIPERGQGGVPPPLPPRPTSFAPSSSSTPHPNYHTTSLP
RSRRLRKLAHDQRRSYHQEVGSDSPRLGNPGLSLSTTEVKEMEESPSSSD
NGTLKKPASKFCTLPRHKHQQQFSIESIAFAKGPGQKSLGFSIVGGKDSP
KGSIGIYVKTIFPNGQAVDRLCEGDEIFSINSVPVQGMTHHEAISMFKEV
KQGSLVLVIGRRTPMKKKAVSFEDSYDEYGFERPDDFDVAAYEAFMSEYL
SILVRRGQKWERLFNKSNVEQLQKNRTLKRFVRKGIPSRHRSKVWMMCSG
ADEMCRKQPNHYREMLSHTPESVTYEQIQVDLHRTFPSNMYFTKEDDVKS
LRKPLKNVLVAFANSNVYIGYCQGLNYVAGMLLIVTKDELKSFWLLKALT
EHLLPQYYGPNIPGLLTDVKVLAEIIRIKSPATYKHVEAFKIPWAMVCSK
WFVCLFSDVLPVETVLRIWDCLFYEGSKILLRAAITLILTNQSKILKTKE
FSELVETFQKCSVTQETINCHDFITTMFLKSSPLPSSKIAKLRNHYNEEM
ELEIGKTPKKA back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
|
