Tk12243, Tk12243 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12243
Unique NameTk12243
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length1098
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 452..668
e-value: 6.6E-6
score: 35.6
IPR011527ABC transporter type 1, transmembrane domainPFAMPF06472ABC_membrane_2coord: 65..344
e-value: 2.1E-54
score: 184.7
NoneNo IPR availableGENE3D3.40.50.300coord: 399..644
e-value: 2.9E-29
score: 104.1
NoneNo IPR availablePANTHERPTHR11384ATP-BINDING CASSETTE, SUB-FAMILY D MEMBERcoord: 63..631
NoneNo IPR availablePANTHERPTHR11384:SF28ATP-BINDING CASSETTE SUB-FAMILY D MEMBER 4coord: 63..631
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 255..325
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..78
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 99..132
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 326..348
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 133..152
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 349..1098
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 227..231
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 232..254
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 204..226
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 153..203
NoneNo IPR availableCDDcd03223ABCD_peroxisomal_ALDPcoord: 426..631
e-value: 2.0401E-57
score: 193.139
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
NoneNo IPR availableTMHMMTMhelixcoord: 319..341
NoneNo IPR availableTMHMMTMhelixcoord: 131..153
NoneNo IPR availableTMHMMTMhelixcoord: 232..254
NoneNo IPR availableTMHMMTMhelixcoord: 200..222
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 444..589
e-value: 6.8E-12
score: 46.0
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 426..656
score: 12.005
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 561..575
IPR036640ABC transporter type 1, transmembrane domain superfamilySUPERFAMILY90123ABC transporter transmembrane regioncoord: 76..377
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 422..629

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold87_size395581-snap-gene-2.14-mRNA-1maker-scaffold87_size395581-snap-gene-2.14-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12243 ID=Tk12243|Name=Tk12243|organism=Tigriopus kingsejongensis|type=polypeptide|length=1098bp
LRMSLTPSKPVVKATVLNTPLSREKSEGPIVPRTELEIYRDTSMGDRGSL
GHPRSGTKVETYNGFNWTFIQRLAKLHRFLFPSWASATLILIVILLIVRG
VEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRI
WLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADI
GTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIV
NKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTK
EKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDY
LDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEI
FDTSSSDESKEHGTTAIDLPRPGLAFKLSHVTVTAPGLDRSLIQDLDLDI
VLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNISVMFMPQKTF
VTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLD
YDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLY
EKCSELAITCVSVGHRKTLNEYHQKILRISGLAEDGDRGNDNNVRWTIQN
DIPRRVRSRNSIQMPNADERATIRLVRRALSTLCPHEVPRLDFILDGFQP
EDVAGLLALVYQGHFESSLKRIKRVKALTKCFQMNPLLAHRPVTPQIDGR
FGDKVSFVHSTASNRGYEAPLARSLSPIPEGELHYPLHDLNVPIELLSHL
PDEFLNDSMPKESPRSLPVLNHGCQAESRSTPQIVNVFPTEMNKEDATGL
VGPERHDIRVSMAAGRVEVGPGSNNNWSDVEPMLELAKNRICFICQQDFS
GLPWCRLKDHVTFHFRREILALFPRSAKNCEVCQMTPNNMVRHLGNDHGA
LKKFIPTDLAILLFNRGRSGVKTMKHIRRIVGKDKMAKMSPKKLLNTVQG
GQKVKEIKAPAAAFEQVFNPENMRIMLQACREKQNVCPLCHKLVGSIRSH
LGTHFGRFIVNQPKLLQDRTCQVCGKKNKTNNAAALHIGFTHNEYQKM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR011527ABC1_TM_dom
IPR003439ABC_transporter-like
IPR017871ABC_transporter_CS
IPR036640ABC1_TM_sf
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0016887ATPase activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
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