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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR005428 | CD36/scavenger receptor class B member 1 | PRINTS | PR01610 | CD36ANTIGEN | coord: 455..477
score: 23.91
coord: 142..162
score: 25.4
coord: 40..62
score: 18.84
coord: 414..428
score: 31.11
coord: 81..103
score: 39.86 |
| IPR002159 | CD36 family | PRINTS | PR01609 | CD36FAMILY | coord: 71..92
score: 29.47
coord: 124..143
score: 40.86
coord: 97..109
score: 51.99
coord: 265..289
score: 28.69
coord: 336..360
score: 39.59
coord: 385..406
score: 37.62 |
| IPR002159 | CD36 family | PFAM | PF01130 | CD36 | coord: 33..475
e-value: 5.5E-134
score: 447.1 |
| IPR002159 | CD36 family | PANTHER | PTHR11923 | SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1 | coord: 14..488 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 705..721 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 675..704 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 649..723 |
| None | No IPR available | PANTHER | PTHR11923:SF10 | FI02050P-RELATED | coord: 14..488 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 50..457 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 27..49 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 458..480 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 481..754 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..26 |
| None | No IPR available | TMHMM | TMhelix | | coord: 27..49 |
| None | No IPR available | TMHMM | TMhelix | | coord: 458..480 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk12252 ID=Tk12252|Name=Tk12252|organism=Tigriopus kingsejongensis|type=polypeptide|length=754bp
MRRWIPGHKAGGGQCCRRLSQRGLTCICLAFVGLMVSSAGFVVIFPHLFQ
KILSQQMTIKEGTPAYKEWMATSVPIFTKMYLFSLQNPDETLAKTEKPKL
IQRGPYTFREVERKDHVMFNDNHTVSYQVKKNWYFEPEMSVGTLDDIITT
VNVPMIGSAEASRGQFFMQWGLSSTFDNIGSQLFIKKTVRELLFEGYEDT
LLALADWFGQESSIPLDRFGWFYKRNGTTWADGTFNMYTGERDIAEMGKI
NHWNYENRTQFDDECGRIHGSAGGFYPPGEARKSLLLFSHEACRTLSFNF
KGKQSIENVPGLMYKLDETTFANETVYPPNYCFHNNLPSGVQNSTQCKQD
SPAYISFPHFYQADPFFQSQFQDGSIQPDGDRHESRIVLEPLTGIPMEVL
IRLQINVRIDPIQGISALANVPKEFYFPVIWFEAHAVATPSVAQTIALLV
QMPQIANLIGVILVMIGLIGVIICVSIRCYRFYVQPKRIKYEAGKSSEDE
FIAADLEDKASLKGEPRGAPIIKSMYGRQISGGSSMDDEAFSLQASNSLS
ESDSFPPAIGSLSPGTGGNEEDRGDLANGNALLQPDDPVGENGTSTHTYQ
NDGPYQPVDGHVTGKEEEYHAREQTQDVEANELGGMDEFDSKDHAQFGET
GHAKEQRGQKGSSRRGQVGEEGIGGYEMAEREGTKTSSRKEFGNVSKEAS
EAKLRSVESSSTTSLVSASTPEGAPSCGVMWLGNVVLNLLNTFCQVASGM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
| Term | Definition |
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| GO:0016020 | membrane |
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