Tk12255, Tk12255 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12255
Unique NameTk12255
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length434
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14697Fer4_21coord: 340..398
e-value: 4.4E-23
score: 81.1
NoneNo IPR availableGENE3D3.30.70.20coord: 312..417
e-value: 1.3E-23
score: 84.6
NoneNo IPR availablePANTHERPTHR43073:SF2DIHYDROPYRIMIDINE DEHYDROGENASE NADP +coord: 314..406
coord: 2..317
NoneNo IPR availablePANTHERPTHR43073FAMILY NOT NAMEDcoord: 314..406
coord: 2..317
NoneNo IPR availableCDDcd02940DHPD_FMNcoord: 3..303
e-value: 2.37948E-176
score: 492.57
NoneNo IPR availableSUPERFAMILY548624Fe-4S ferredoxinscoord: 339..413
NoneNo IPR availableSUPERFAMILY51395FMN-linked oxidoreductasescoord: 1..323
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 4..311
e-value: 5.1E-101
score: 340.1
IPR005720Dihydroorotate dehydrogenase domainTIGRFAMTIGR01037TIGR01037coord: 4..322
e-value: 4.0E-50
score: 168.5
IPR005720Dihydroorotate dehydrogenase domainPFAMPF01180DHO_dhcoord: 4..307
e-value: 8.4E-28
score: 97.3
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved sitePROSITEPS001984FE4S_FER_1coord: 380..391
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROSITEPS513794FE4S_FER_2coord: 371..401
score: 9.743
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROSITEPS513794FE4S_FER_2coord: 338..370
score: 8.911

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold3497_size8418-processed-gene-0.3-mRNA-1snap_masked-scaffold3497_size8418-processed-gene-0.3-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12255 ID=Tk12255|Name=Tk12255|organism=Tigriopus kingsejongensis|type=polypeptide|length=434bp
MADLTTDFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGAE
GPPVVNVNGPRYGVIHGADRRVLGLNNIELITDRDLQTNLDEITRVKRDY
PDRAMIVSIMVPCEEQAWKDILPKVEATGADGIELNFGCPHGMSERGMGA
AVGQVPEYIEMVTRWCKQYYSKPVIVKLTPNITDIRIPAAAAMRGGADAV
SLINTINSIVSVNLDTMSPEPSIDGKGSHGGYCGPAVKPIALSMVSEIAR
APATAGLPISGIGGVTTWRDAAEYITMGCGNVQVCTAAMTYGFKVVQEMI
SGLSEWMDEKGHTSIDDFKGAAIPNTTDWKYLNLNYIAKASINQDDCISC
GRCFAACEDTSHQAIAMSEDRTFTVIDEECVACNLCVEVCPVDNCITMVP
MAKGATDPRTGKVVEDAYANWTTHPNNPSATAAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR005720Dihydroorotate_DH
IPR0179004Fe4S_Fe_S_CS
IPR0178964Fe4S_Fe-S-bd
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
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