Tk12258, Tk12258 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12258
Unique NameTk12258
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length1410
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 618..638
NoneNo IPR availableGENE3D2.170.140.10coord: 508..579
e-value: 5.7E-9
score: 37.4
NoneNo IPR availableGENE3D3.20.20.80coord: 61..309
e-value: 2.5E-139
score: 466.3
coord: 383..431
e-value: 2.5E-139
score: 466.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1198..1226
NoneNo IPR availablePANTHERPTHR11177CHITINASEcoord: 59..473
NoneNo IPR availablePANTHERPTHR11177:SF217OVIDUCT-SPECIFIC GLYCOPROTEINcoord: 59..473
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..1410
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..26
NoneNo IPR availableCDDcd02872GH18_chitolectin_chitotriosidasecoord: 61..432
e-value: 1.4469E-176
score: 527.127
IPR011583Chitinase IISMARTSM006362g34coord: 59..411
e-value: 4.4E-133
score: 458.1
IPR002557Chitin binding domainSMARTSM00494chi_10coord: 515..573
e-value: 5.4E-13
score: 59.2
coord: 1289..1345
e-value: 5.4E-4
score: 29.3
IPR002557Chitin binding domainPFAMPF01607CBM_14coord: 1291..1343
e-value: 1.8E-7
score: 31.2
coord: 517..571
e-value: 2.1E-10
score: 40.5
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 514..573
score: 11.858
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 1288..1340
score: 8.573
IPR029070Chitinase insertion domain superfamilyGENE3D3.10.50.10coord: 310..382
e-value: 2.5E-139
score: 466.3
IPR029070Chitinase insertion domain superfamilySUPERFAMILY54556Chitinase insertion domaincoord: 311..382
IPR001223Glycoside hydrolase family 18, catalytic domainPFAMPF00704Glyco_hydro_18coord: 60..411
e-value: 3.8E-85
score: 286.2
IPR001579Glycoside hydrolase, chitinase active sitePROSITEPS01095CHITINASE_18coord: 173..181
IPR036508Chitin binding domain superfamilySUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 1290..1342
IPR036508Chitin binding domain superfamilySUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 507..573
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 391..441
coord: 58..319

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold847_size89293-snap-gene-0.15-mRNA-1maker-scaffold847_size89293-snap-gene-0.15-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12258 ID=Tk12258|Name=Tk12258|organism=Tigriopus kingsejongensis|type=polypeptide|length=1410bp
LRDPLSELLHTQLSVIMTAFKMRSKEIIVAILWMISLIVADVSAKSHHVE
KRQIGSPGQRVVCYFANWAVYRQGTAKFTPQNINPYLCTHLIYAFGGLTT
EDTIQPFDKYQDIEKGGYSQFAALKTYNKELKTLLAIGGWNEGSKRFSPM
VADPARRRTFIKSSIRFLRQYNFDGIDLDWEYPAFRDGGKPQDRVNYAKL
IIDMREAFDLDAERTGKERLLITMAVPASLEYASKGFDIKELDKHLDWFN
FLTYDYHSSYEPSTNHHSPLFRPKDVSEYDFRADLNIDATVKHYIKSGAS
RDKIVLGIPTYGRSYTLINPDAHAIGSPTDGPGEQGKGTKEDGYLAYYEI
CDGIKNQDWIVERPNPGIVGPYAHKDNFWVGYDDINAAMDKAIYVSEEGL
GGIMFWTIDNDDFRGACHDKPFQLIESAKEALFGKVNSQVKTSFSVSTSE
QTRVERVKLTSQQLEDLSSQEEDGEKNLPRQPLTPRPRAIQSGTVTVDPF
NTPSPPTTPRNEPAFECQSEGFFPHKTICKKYYWCLETAGLGMVAHTFTC
PGGLYFNVGTSGCDFSRNVDCGEKDTDVSGGSSSTTTETPYASFEDDSEE
DPQSLKGILASIKAAGGLEAFEDQLQEEEERKEELVFQENTRKTEISSQT
RNRLNQLLGRKKSESNNRLRGGDAETTTETSPSSQSQPETSTQSTTEAAP
NSSTEKLNLLGRLANRRLTSGGNDRLTRLRQRFQTKTKQGETSPVADVEE
EQEDIKSNPSSSSEASQAPTTTARSRLFRNRNRFALNRGQSKDNVVEQAT
SAAPRVRNILRGRDRFRNTLARPSASSPPPPEVTSTEASSPINPDLESSE
DETTTSTLRPNRFRPKSGTRDRLRSIVQESLEEETGDDEPAFITSDKQRV
PPVFSNEPVPALSTSTARSNLEYVTLSRGSSVSEDGPSDPLGSPSSESES
QFVTPLPFDAAIRDENNEEDDFRLGITQEPARSLEYVTLRRGQSPGTNTV
QDFSDEVLNNQGNIETLETVQPDLQEVSPTPATVVPESSSSVESVSTPNR
PLRRNRPFAPRAGGARFSFPTRNTTPSPPRRSSVLALSNPTSLSDQEVTL
TPSSSPAPTPPQRQEPRKIEISPPFSPSSVAPPLSQRPEEQLFRQVSQFK
DASAKDEEGSAFETRFEGPISPAFTIVDGTEDRPEGPIVATAIPLLTTPT
ARPTVRPLARSPSPSRRRPQVQTTTTAKPEYEYYYEYYYDDDEEETKQSG
SRKESNLIPESRSKPIESIDDYDIVPLTNKVEILPSGRTLCHDVGVFPHP
HSCRKFVMCSRRTTRDGITGWEYECPIYLAFDPVGGRCNWARQHFEEKQT
RSISQAHAWKLGEVVPSSMSLAFGIFQIQIGLQNTVNASRLGSVKGKNLV
RRNRFRLELP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011583Chitinase_II
IPR002557Chitin-bd_dom
IPR029070Chitinase_insertion_sf
IPR001223Glyco_hydro18_cat
IPR001579Glyco_hydro_18_chit_AS
IPR036508Chitin-bd_dom_sf
IPR017853Glycoside_hydrolase_SF
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
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