|
Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR000995 | Muscarinic acetylcholine receptor family | PRINTS | PR00243 | MUSCARINICR | coord: 124..134 score: 50.99 coord: 76..88 score: 45.82 coord: 97..105 score: 52.66 coord: 211..221 score: 45.45 coord: 174..188 score: 75.07 coord: 155..164 score: 76.96 |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PRINTS | PR00237 | GPCRRHODOPSN | coord: 109..130 score: 33.48 coord: 154..176 score: 34.48 coord: 76..100 score: 20.72 coord: 190..211 score: 23.51 coord: 239..262 score: 23.68 |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PFAM | PF00001 | 7tm_1 | coord: 91..282 e-value: 1.4E-48 score: 165.4 |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PROSITE | PS00237 | G_PROTEIN_RECEP_F1_1 | coord: 160..176 |
None | No IPR available | GENE3D | 1.10.530.40 | | coord: 268..281 e-value: 1.1E-67 score: 230.8 |
None | No IPR available | GENE3D | 1.20.1070.10 | | coord: 80..267 e-value: 1.1E-67 score: 230.8 |
None | No IPR available | PANTHER | PTHR43914 | FAMILY NOT NAMED | coord: 63..287 |
None | No IPR available | PANTHER | PTHR43914:SF8 | MUSCARINIC ACETYLCHOLINE RECEPTOR GAR-3 | coord: 63..287 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 236..259 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 138..148 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 171..190 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 191..216 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 260..298 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 111..137 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..75 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 217..235 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 100..110 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 76..99 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 149..170 |
None | No IPR available | SUPERFAMILY | 81321 | Family A G protein-coupled receptor-like | coord: 50..280 |
None | No IPR available | TMHMM | TMhelix | | coord: 77..99 |
None | No IPR available | TMHMM | TMhelix | | coord: 111..133 |
None | No IPR available | TMHMM | TMhelix | | coord: 191..213 |
None | No IPR available | TMHMM | TMhelix | | coord: 148..170 |
None | No IPR available | TMHMM | TMhelix | | coord: 240..262 |
IPR017452 | GPCR, rhodopsin-like, 7TM | PROSITE | PS50262 | G_PROTEIN_RECEP_F1_2 | coord: 91..298 score: 33.632 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk12270 ID=Tk12270|Name=Tk12270|organism=Tigriopus kingsejongensis|type=polypeptide|length=298bp LSLAAAHVHQDELDSVKIGKLALGKSSCTMDSHNLGYGEGTTPPIFSTAS LSNSTSDLYASESEVIEPYTPLQASLIGISAGLLSFVTIAGNLMVMISFK MDKQLQTISNYFLFSLAVADIIIGLISMPLFTVFLIQQEWTFGVTICDTW LSVDYLASNASVLNLLVISFDRYFSVTRPLTYRVRRTTRKAALMIFSAWA VSVIVWPPWIFAWPYIEGIRTVPDNDCYIQFIYSNEYMSIVTVMIAFFVP VSVMIGLYVRVWWETVKRQRELVHLQGGKKVNSKRSDSSSADLQVPFT back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
Term | Definition |
GO:0005887 | integral component of plasma membrane |
GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
Term | Definition |
GO:0016907 | G-protein coupled acetylcholine receptor activity |
GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Biological Process
Term | Definition |
GO:0007186 | G-protein coupled receptor signaling pathway |
|