Tk12270, Tk12270 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12270
Unique NameTk12270
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length298
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000995Muscarinic acetylcholine receptor familyPRINTSPR00243MUSCARINICRcoord: 124..134
score: 50.99
coord: 76..88
score: 45.82
coord: 97..105
score: 52.66
coord: 211..221
score: 45.45
coord: 174..188
score: 75.07
coord: 155..164
score: 76.96
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 109..130
score: 33.48
coord: 154..176
score: 34.48
coord: 76..100
score: 20.72
coord: 190..211
score: 23.51
coord: 239..262
score: 23.68
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 91..282
e-value: 1.4E-48
score: 165.4
IPR000276G protein-coupled receptor, rhodopsin-likePROSITEPS00237G_PROTEIN_RECEP_F1_1coord: 160..176
NoneNo IPR availableGENE3D1.10.530.40coord: 268..281
e-value: 1.1E-67
score: 230.8
NoneNo IPR availableGENE3D1.20.1070.10coord: 80..267
e-value: 1.1E-67
score: 230.8
NoneNo IPR availablePANTHERPTHR43914FAMILY NOT NAMEDcoord: 63..287
NoneNo IPR availablePANTHERPTHR43914:SF8MUSCARINIC ACETYLCHOLINE RECEPTOR GAR-3coord: 63..287
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 236..259
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 138..148
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 171..190
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 191..216
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 260..298
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 111..137
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 217..235
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 100..110
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..99
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..170
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 50..280
NoneNo IPR availableTMHMMTMhelixcoord: 77..99
NoneNo IPR availableTMHMMTMhelixcoord: 111..133
NoneNo IPR availableTMHMMTMhelixcoord: 191..213
NoneNo IPR availableTMHMMTMhelixcoord: 148..170
NoneNo IPR availableTMHMMTMhelixcoord: 240..262
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 91..298
score: 33.632

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1621_size33243-snap-gene-0.9-mRNA-1maker-scaffold1621_size33243-snap-gene-0.9-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12270 ID=Tk12270|Name=Tk12270|organism=Tigriopus kingsejongensis|type=polypeptide|length=298bp
LSLAAAHVHQDELDSVKIGKLALGKSSCTMDSHNLGYGEGTTPPIFSTAS
LSNSTSDLYASESEVIEPYTPLQASLIGISAGLLSFVTIAGNLMVMISFK
MDKQLQTISNYFLFSLAVADIIIGLISMPLFTVFLIQQEWTFGVTICDTW
LSVDYLASNASVLNLLVISFDRYFSVTRPLTYRVRRTTRKAALMIFSAWA
VSVIVWPPWIFAWPYIEGIRTVPDNDCYIQFIYSNEYMSIVTVMIAFFVP
VSVMIGLYVRVWWETVKRQRELVHLQGGKKVNSKRSDSSSADLQVPFT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000995Musac_Ach_rcpt
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016907G-protein coupled acetylcholine receptor activity
GO:0004930G-protein coupled receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
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