Tk12296, Tk12296 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12296
Unique NameTk12296
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length452
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000891Pyruvate carboxyltransferasePFAMPF00682HMGL-likecoord: 173..435
e-value: 5.3E-51
score: 173.6
IPR000891Pyruvate carboxyltransferasePROSITEPS50991PYR_CTcoord: 173..442
score: 29.618
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 169..450
e-value: 5.3E-124
score: 415.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availablePANTHERPTHR42738FAMILY NOT NAMEDcoord: 163..435
NoneNo IPR availableCDDcd07938DRE_TIM_HMGLcoord: 175..435
e-value: 8.92078E-168
score: 470.336
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 168..435
IPR027167Hydroxymethylglutaryl-CoA lyasePANTHERPTHR42738:SF4TA01441Pcoord: 163..435

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold324_size206069-processed-gene-1.20-mRNA-1snap_masked-scaffold324_size206069-processed-gene-1.20-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12296 ID=Tk12296|Name=Tk12296|organism=Tigriopus kingsejongensis|type=polypeptide|length=452bp
MGPAVDTPPPDPLGPTKAGRGGSAIPVDVGIWGAKAGKAGVEPLIIFKPL
TPHRPKSRSPTASSPARTAIFRMLVCGLASISQATPIRNSSLSFLLWPPL
PLLLINDLSSFPSFLTLSTRLREHDTMSITSLTVIPAERRSRTRRLLASI
FTKTERTEAGNPHLTQAVLPTSVRIVEVGPRDGLQNEKKVVPTEVKLNFI
CKLAASGLTHVEATSFVSPKWVPQMADHMEIMAGLQESNVDNISFPVLVP
NLKGLEAALKVGVKEIAVFGAASETFTKKNINCSISESLKRFESVMTKAQ
DNHLKVRGYVSCVVGCPYEGPIQPQAVAEVVRAMKDMGCYEISLGDTIGV
GTPGSFRNMLEAVLKYLEPQDLAVHCHDTYGQALANILTSLEYQIAVIDA
STAGLGGCPYAKGASGNVATEDVIYMLHGMGIHTGHLNSCPHVGLLSKAL
GG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000891PYR_CT
IPR013785Aldolase_TIM
IPR027167HMG-CoA_lyase
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004419hydroxymethylglutaryl-CoA lyase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
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