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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR002347 | Short-chain dehydrogenase/reductase SDR | PRINTS | PR00081 | GDHRDH | coord: 219..235
score: 28.84
coord: 169..180
score: 49.45
coord: 257..276
score: 29.34
coord: 93..110
score: 42.33
coord: 278..295
score: 40.07 |
| IPR002347 | Short-chain dehydrogenase/reductase SDR | PFAM | PF00106 | adh_short | coord: 92..297
e-value: 2.6E-33
score: 115.1 |
| None | No IPR available | GENE3D | 3.40.50.720 | | coord: 83..343
e-value: 1.4E-72
score: 246.2 |
| None | No IPR available | PANTHER | PTHR24320:SF150 | SUBFAMILY NOT NAMED | coord: 73..317 |
| None | No IPR available | PANTHER | PTHR24320 | FAMILY NOT NAMED | coord: 73..317 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..56 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 57..75 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 76..375 |
| None | No IPR available | CDD | cd05327 | retinol-DH_like_SDR_c_like | coord: 91..314
e-value: 2.17868E-88
score: 265.627 |
| IPR036291 | NAD(P)-binding domain superfamily | SUPERFAMILY | 51735 | NAD(P)-binding Rossmann-fold domains | coord: 89..300 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk12298 ID=Tk12298|Name=Tk12298|organism=Tigriopus kingsejongensis|type=polypeptide|length=375bp
MGLDGLFDVLEDFRLYCLSFWSDFYVLTHELAPGNVVSKVWNTYLIWFHQ
LPLISKIILVGSILFLVTVVVSKIFTKLTCGVCTSKAKLQGKTVLITGAN
SGIGYEAALDLARRGARVVLGCRNLDRGREAAQAIIKETQNRNVSVHVVD
LSSKASVRRFAIEFLERERSLDILILNAGIALTKKYMTEDNFELHMASNH
FGHFLLTNLLAPLMIQSAQRSKTPGRIVVVSSLAHWFGKIELDNLNSERS
YDSSRIYGNTKLANLLFVKELARRLKSRNIVVNAVHPGAVQTGLFRNIPY
FGPIIMFFIGLSQKSAQDIPVRSVDEGSHGYGRRVWELIRPSLDHDHVIG
GPAGAHRSWYIGWSPIVGPHHRLSH back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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