Tk12306, Tk12306 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12306
Unique NameTk12306
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length268
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 219..240
score: 94.86
coord: 139..160
score: 93.58
coord: 203..219
score: 96.93
coord: 163..180
score: 97.46
coord: 122..136
score: 66.38
coord: 185..203
score: 87.3
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 139..241
e-value: 4.5E-75
score: 265.4
IPR000164Histone H3/CENP-APANTHERPTHR11426HISTONE H3coord: 113..240
IPR000164Histone H3/CENP-APROSITEPS00959HISTONE_H3_2coord: 172..180
IPR009072Histone-foldGENE3D1.10.20.10coord: 110..241
e-value: 3.8E-70
score: 236.1
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 114..238
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 125..237
e-value: 8.2E-48
score: 162.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..146
NoneNo IPR availablePANTHERPTHR11426:SF177SUBFAMILY NOT NAMEDcoord: 113..240

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold2342_size16862-processed-gene-0.0-mRNA-1snap_masked-scaffold2342_size16862-processed-gene-0.0-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12306 ID=Tk12306|Name=Tk12306|organism=Tigriopus kingsejongensis|type=polypeptide|length=268bp
MKDKISKRLDWPTAQVHEVKLSPDGLLGQKNGLDVGEHTTLGDGHTREQL
VQLLVVTDGQLQVTGDDAGLLVVTGSIAGQLEDLSRQVLHDGGQVDGGSG
SHTLGIVALAEETMDSAHGELETSSLATKAARKSAPATGGVKKPHRYRPG
TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQE
ASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERCLHLRLSDES
IPIRYYLNDSTEKPLVSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000164Histone_H3/CENP-A
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046982protein heterodimerization activity
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
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