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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR003593 | AAA+ ATPase domain | SMART | SM00382 | AAA_5 | coord: 65..248 e-value: 5.0E-13 score: 59.3 |
None | No IPR available | GENE3D | 3.40.50.300 | | coord: 57..271 e-value: 4.4E-58 score: 198.6 |
None | No IPR available | PANTHER | PTHR42711 | FAMILY NOT NAMED | coord: 64..278 |
None | No IPR available | PANTHER | PTHR42711:SF5 | SUBFAMILY NOT NAMED | coord: 64..278 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 17..34 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 61..282 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 35..39 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..16 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 40..60 |
None | No IPR available | TMHMM | TMhelix | | coord: 15..34 |
None | No IPR available | TMHMM | TMhelix | | coord: 41..60 |
IPR011547 | SLC26A/SulP transporter domain | PFAM | PF00916 | Sulfate_transp | coord: 2..67 e-value: 8.8E-13 score: 47.7 |
IPR003439 | ABC transporter-like | PFAM | PF00005 | ABC_tran | coord: 64..200 e-value: 5.0E-30 score: 104.7 |
IPR003439 | ABC transporter-like | PROSITE | PS50893 | ABC_TRANSPORTER_2 | coord: 41..271 score: 19.201 |
IPR017871 | ABC transporter, conserved site | PROSITE | PS00211 | ABC_TRANSPORTER_1 | coord: 172..186 |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 63..261 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk12414 ID=Tk12414|Name=Tk12414|organism=Tigriopus kingsejongensis|type=polypeptide|length=282bp MGTVVNVQVGARSPLSGIVRALILAAVVLVAGFLTEPIPMAVLAGIALYV GINILDWSFLQRAHKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVKIF GYDIDTDLVEAKKQLGLVPQEFNFNQYEKVEQILVNQAGYYGVERAEAKV RAKKYLTLLDLWEKRDEPSRTLSGGMKRRLMIARALMHEPKLLILDEPTA GVDIELRRSMWTFLKEINEKGITIILTTHYLEEAEMLCRNIGIINRGELV EDTSMKALLKKLDVETFVLDLAPDSKVTNLED back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
Term | Definition |
GO:0008272 | sulfate transport |
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
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