Tk12417, Tk12417 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12417
Unique NameTk12417
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length188
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000883Cytochrome c oxidase subunit IPRINTSPR01165CYCOXIDASEIcoord: 29..52
score: 32.05
coord: 57..81
score: 47.06
IPR000883Cytochrome c oxidase subunit IPFAMPF00115COX1coord: 11..79
e-value: 8.9E-12
score: 44.5
IPR000883Cytochrome c oxidase subunit IPANTHERPTHR10422CYTOCHROME C OXIDASE SUBUNIT 1coord: 23..78
IPR036927Cytochrome c oxidase-like, subunit I superfamilyGENE3D1.20.210.10coord: 1..82
e-value: 2.4E-17
score: 64.4
IPR036927Cytochrome c oxidase-like, subunit I superfamilySUPERFAMILY81442Cytochrome c oxidase subunit I-likecoord: 2..78
NoneNo IPR availablePANTHERPTHR10422:SF35CYTOCHROME BO 3 UBIQUINOL OXIDASE SUBUNIT 1coord: 23..78
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 61..117
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 154..181
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 143..153
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..60
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 182..188
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..142
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..29
NoneNo IPR availableTMHMMTMhelixcoord: 118..140
NoneNo IPR availableTMHMMTMhelixcoord: 160..182
NoneNo IPR availableTMHMMTMhelixcoord: 37..59
IPR023616Cytochrome c oxidase-like, subunit I domainPROSITEPS50855COX1coord: 1..78
score: 10.436

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold3945_size7060-snap-gene-0.0-mRNA-1maker-scaffold3945_size7060-snap-gene-0.0-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12417 ID=Tk12417|Name=Tk12417|organism=Tigriopus kingsejongensis|type=polypeptide|length=188bp
MQLAWPGEAFPIFEAVLGKWAPGGVMDADVYLALVTIHGTIMVFFVLTAG
LSGTFSNLLIPLQIGARDMASGFLNMISSCGRGLDNLSTFKCIAYGTARI
RNGNDVVNKRDVNDKVAINYLGILCYCNYWGGFISCITFCSIDGNGSLYF
GDCLFIYYCLGSPYVCFWYESVLGVCFYFYYIAYCYSI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000883Cyt_C_Oxase_1
IPR036927Cyt_c_oxase-like_su1_sf
IPR023616Cyt_c_oxase-like_su1_dom
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0009060aerobic respiration
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0020037heme binding
GO:0004129cytochrome-c oxidase activity
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