Tk12435, Tk12435 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12435
Unique NameTk12435
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length1544
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1474..1494
NoneNo IPR availableCOILSCoilCoilcoord: 1382..1423
NoneNo IPR availableGENE3D2.30.42.10coord: 573..652
e-value: 2.8E-15
score: 58.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1305..1330
NoneNo IPR availablePANTHERPTHR15711RAP GTPASE-ACTIVATING PROTEINcoord: 1..1431
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 575..649
e-value: 2.92792E-12
score: 61.4286
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 586..652
e-value: 5.9E-10
score: 49.1
IPR001478PDZ domainPROSITEPS50106PDZcoord: 577..641
score: 12.245
IPR035974Rap/Ran-GAP superfamilyGENE3D3.40.50.11210coord: 217..406
e-value: 8.1E-74
score: 249.1
IPR035974Rap/Ran-GAP superfamilySUPERFAMILY111347Rap/Ran-GAPcoord: 73..434
IPR000331Rap GTPase activating protein domainPFAMPF02145Rap_GAPcoord: 238..418
e-value: 3.7E-59
score: 199.3
IPR000331Rap GTPase activating protein domainPROSITEPS50085RAPGAPcoord: 209..425
score: 68.378
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 575..651

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold924_size80766-snap-gene-0.17-mRNA-1maker-scaffold924_size80766-snap-gene-0.17-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12435 ID=Tk12435|Name=Tk12435|organism=Tigriopus kingsejongensis|type=polypeptide|length=1544bp
CPYFRNEIGGEVERKIALTRQNSSVNANNSTPSDTPSIDAHTPPLARGFS
LLDSVETYWKNGFCPYRRTSANIIERIDYGATFYKNYFCGKDHQNWFGLD
EQLGPVAISIRREKVSLAGLGNGHAFMNGTPSFSSIDNLIAEQHMYRIMI
RTSELLPLRGCVLEDTIPALKSEKIKNLPTKEVLEFVCPEIQLSSLHLGL
QSGPCEEELIRLDEAYVQNKYKVGLMYCREGQQTEEEMYNNEEGGAAFNE
FLELIGQKVRLKGFNSYKAGLCNKNDSTGLFSVYTEHAGNELMFHVSTLL
PFTPNNRQQLPRKRYIGNDIVTLVFQEPGALPFIPNIKSQFQHVFIVVRA
HNPCSENTQYSVAVSRSKSVPIFGPPIPKGARFAKSKAFADFLLTKIINA
ENAAHRSDKFVSMAVRTRQELLKDLATNYVASTTLDSGSKFSLFGKKKDK
SRARFLPDSPGMRGALSWRVVVEDYGAGNRNQTVSSKPGVVLPMEIEALV
AISPDSILVIQESHQHEVLFITASKSILGWTFTPNSIRIYFHQGEALIFH
SKDRESDDMGEIAHRLKAITSGAATQEFTLRRNQMGQLGFHVQHDGLITE
VENFGYAWQTGLRQGSRLVEINKNPVTALSHEQMVELLKTSMTVTVTVIP
PHPDASPRRGCHLKNCSFAFGAPSSSGDFDGDYENVQEQQHQMLHPHFGP
GDIARSQQPVSNGKTVYDASGGRSMSPPRSSNSSGYGTGSSRKSVPEQQR
LMVQQGIPEQADPQDPTQRRWYDVGGEQVQGSSSENSPPPLPTRIGSQGS
AFQKVTASNPNGAKSSPSIYQRPPPPRVTRPGQPVSSNGGVVFSNYATPP
NFVNVPNYQNHQPTTTVKIVGSNNPQAPRGHYHAPGSAHYSAPPNRVNGA
PPPPQSHYGPSGSVNPIQRPVPTHPTPEDPNKVAYLPENTLPPLHVNAPS
TPQQNYEYLQHERLAALKSVSLPPEMVNRPGNGNGKPALSSYVVDGGHTT
DSSSNSERYHAQRSEDELSGSSSSLSPQQNRRRRTHTHHPSNTLGSATPS
RGGNTPSSNGSRNQSPRTVTRSATSAADDANTAGIGIKKRPISRNPNRNS
ANLGSSTLQEDLMKLINPEFNQDLDAAAQKAKSSPVNHTTSVSISTNTPP
PVGGSANPTSSTMGRTPPRAKSISELSLLKTRSRENIASSGPSLAPQGGK
FGDDSASEASFHMARPATVISNKSTDSSSLSGSLNNSARSDRIPTHTPGK
KLLPNTPLKHDPSQARETHSEPPAPGQNGSSMPLPDERMDWTALVDTATR
AIHFSADDSDLPHPPGSTVPSKTEMRSRSTVVLNKADDEHRIKQNHYHST
QELNGQLRQNGHAGTSGNPQNDEKFNHLLDKVNKLESRLNTEAIEKTNLA
EEVAALREENLRLQEESQTASQQLKKFTEWFFQTIDKTSLAGCKSHFTRQ
INSSNKLVEFASATVPSTFLTAELQDALGKVKLAFAKVEEAQNQKFKIQW
VPGKTHEIADALPRAPVFDPEDDMGIDDTNLVLCAAISSDPDVQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR035974Rap/Ran-GAP_sf
IPR000331Rap_GAP_dom
IPR036034PDZ_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005096GTPase activator activity
Vocabulary: Biological Process
TermDefinition
GO:0051056regulation of small GTPase mediated signal transduction
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