Tk12452, Tk12452 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12452
Unique NameTk12452
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length270
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 266..270
NoneNo IPR availableGENE3D1.20.1070.10coord: 5..220
e-value: 1.0E-14
score: 56.2
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..142
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 143..162
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 182..201
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 163..181
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 202..270
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 48..66
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 52..100
coord: 127..218
NoneNo IPR availableTMHMMTMhelixcoord: 145..167
NoneNo IPR availableTMHMMTMhelixcoord: 23..45
NoneNo IPR availableTMHMMTMhelixcoord: 67..89
NoneNo IPR availableTMHMMTMhelixcoord: 182..201
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 23..197
e-value: 1.6E-7
score: 30.7

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold89_size390429-processed-gene-2.0-mRNA-1snap_masked-scaffold89_size390429-processed-gene-2.0-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12452 ID=Tk12452|Name=Tk12452|organism=Tigriopus kingsejongensis|type=polypeptide|length=270bp
MIGHVNALQVSDWTVRKAMKGDLGLHSFASITINLGPTFLSGALAANSES
YLNKPSCPLIQGPFRHYVLNVLWIFINVLCVLLTMYHLYKLYKDLSQSNL
ETLRVASMVSTMISVNGTDQETRDSRRLKSYIAKMEQEGIARVKMFLAIT
IAYLIFWGPLFLVTLFSYGDYKTETPSTSHEVTLHVAFVHAFVNPTLFLV
LHKGLRTATLDLLCCNFRGGDIVAEEYPSMFTPGGASIEGGGMTSLPPDG
NGLAPDGLLPPIASINRSYM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
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