Tk12484, Tk12484 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12484
Unique NameTk12484
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length263
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 24..96
e-value: 2.2E-19
score: 80.4
coord: 141..211
e-value: 1.9E-21
score: 87.3
IPR009071High mobility group box domainPFAMPF09011HMG_box_2coord: 25..95
e-value: 8.7E-18
score: 64.6
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 142..209
e-value: 2.4E-18
score: 66.2
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 25..95
score: 15.126
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 142..210
score: 17.48
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 18..95
e-value: 6.4E-27
score: 95.7
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 123..214
e-value: 1.2E-24
score: 88.3
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 126..212
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 22..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..263
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..263
NoneNo IPR availablePANTHERPTHR13711SWI/SNF-RELATED CHROMATIN BINDING PROTEINcoord: 23..110
coord: 125..253
NoneNo IPR availablePANTHERPTHR13711:SF290HIGH MOBILITY GROUP PROTEIN DSP1coord: 125..253
NoneNo IPR availablePANTHERPTHR13711:SF290HIGH MOBILITY GROUP PROTEIN DSP1coord: 23..110
NoneNo IPR availableCDDcd01390HMGB-UBF_HMG-boxcoord: 25..91
e-value: 1.37914E-17
score: 72.6605
NoneNo IPR availableCDDcd01390HMGB-UBF_HMG-boxcoord: 142..207
e-value: 1.08526E-17
score: 73.0457

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold789_size96855-snap-gene-0.29-mRNA-1maker-scaffold789_size96855-snap-gene-0.29-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12484 ID=Tk12484|Name=Tk12484|organism=Tigriopus kingsejongensis|type=polypeptide|length=263bp
LATVPGSAELMPRGRLRQPPTGDVPKGRMTPYAFFVQLCRDEHRRVHPDE
NVVFAEFSRKCADRWKTMSEREKKRFHQMAEADEKRYQLEMTAYESGRDV
AARRGLHARKRQELAFGATADTAEPAGAKKRKKRKKKDPNAPKRAMSAFF
WFSQDERAKVRAANPDFGVGDTAKELSRRWAETAPEIRSKFESLAEKDRA
RYDRDKREYQKTLLMGQVVEVTVAEPRPAPNPEQVQEPDDSIEDPEEEIE
PVEEESEEEPESD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
IPR036910HMG_box_dom_sf
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