Tk12506, Tk12506 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12506
Unique NameTk12506
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length289
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011256Regulatory factor, effector binding domain superfamilyGENE3D3.20.80.10coord: 136..289
e-value: 1.5E-39
score: 137.6
IPR011256Regulatory factor, effector binding domain superfamilySUPERFAMILY55136Probable bacterial effector-binding domaincoord: 134..288
IPR006917SOUL haem-binding proteinPFAMPF04832SOULcoord: 137..286
e-value: 1.2E-32
score: 113.3
IPR006917SOUL haem-binding proteinPANTHERPTHR11220HEME-BINDING PROTEIN-RELATEDcoord: 145..286
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..58
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 59..289
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1590_size34775-snap-gene-0.5-mRNA-1maker-scaffold1590_size34775-snap-gene-0.5-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12506 ID=Tk12506|Name=Tk12506|organism=Tigriopus kingsejongensis|type=polypeptide|length=289bp
LDVFCLVTFWAASSLSLLCLQKPNHGYLQVQFKNIVHTINMINILALIVF
TSAAALALPAVEESGLNEVVSDPKDSGTEYVEPYYQVVRTLANGEIEERK
YIADLPWACVTKGGDVTRRNMFWSLFRFIDGQNDAERKYIADLPWACVTK
GGDVTRRNMFWSLFRFIDGQNDAGMKISMSTPVRSTRNADESEDRKMCFF
LGQKFQDTQPPTPNDSSVTIERTPEMTVYTRRVGGNMRGSDWDDEFDALK
TLLKTNNIDDMETSYYYRNGYDSPRKLTNRRNEVWIVKK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011256Reg_factor_effector_dom_sf
IPR006917SOUL_haem-bd
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