Tk12573, Tk12573 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12573
Unique NameTk12573
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length195
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001523Paired domainPRINTSPR00027PAIREDBOXcoord: 92..109
score: 53.75
coord: 74..91
score: 79.34
coord: 36..51
score: 93.82
coord: 54..72
score: 74.69
IPR001523Paired domainSMARTSM00351pax3coord: 32..157
e-value: 3.7E-85
score: 298.9
IPR001523Paired domainPFAMPF00292PAXcoord: 32..157
e-value: 1.6E-63
score: 212.1
IPR001523Paired domainPROSITEPS00034PAIRED_1coord: 66..82
IPR001523Paired domainPROSITEPS51057PAIRED_2coord: 32..159
score: 62.678
IPR001523Paired domainCDDcd00131PAXcoord: 32..160
e-value: 1.52523E-77
score: 225.761
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 26..100
e-value: 2.7E-38
score: 131.5
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 101..164
e-value: 1.0E-29
score: 104.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..189
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..195
NoneNo IPR availablePANTHERPTHR24329FAMILY NOT NAMEDcoord: 27..166
NoneNo IPR availablePANTHERPTHR24329:SF10PAIRED BOX PROTEIN PAX-2coord: 27..166
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 34..160

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold298_size217389-snap-gene-0.14-mRNA-1maker-scaffold298_size217389-snap-gene-0.14-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12573 ID=Tk12573|Name=Tk12573|organism=Tigriopus kingsejongensis|type=polypeptide|length=195bp
MAVRPWNVSHLLVPNLAFAPTQEGNGTMPHTGQAGVNQLGGVFVNGRPLP
DYIRRRIVELAMMGVRPCDISRQLLVSHGCVSKILTRFYETGSVKPGSIG
GTKPKQVATPSVVKRILRIKTENPALFAWEIREQLLAQRVCDPNNIPSVS
SINRILRNAGHPPDPPEATPQATPPKTTSASSSSTVVTGALLAPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001523Paired_dom
IPR036388WH-like_DNA-bd_sf
IPR009057Homeobox-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
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