EMLSAT00000000350, EMLSAT00000000350-696197 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000350
Unique NameEMLSAT00000000350-696197
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s104supercontigLSalAtl2s104:877817..880136 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000350 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000350EMLSAG00000000350-683116Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001621EMLSAE00000001621-710549Lepeophtheirus salmonisexon
EMLSAE00000001622EMLSAE00000001622-710550Lepeophtheirus salmonisexon
EMLSAE00000001623EMLSAE00000001623-710551Lepeophtheirus salmonisexon
EMLSAE00000001624EMLSAE00000001624-710552Lepeophtheirus salmonisexon
EMLSAE00000001625EMLSAE00000001625-710553Lepeophtheirus salmonisexon
EMLSAE00000001626EMLSAE00000001626-710554Lepeophtheirus salmonisexon
EMLSAE00000001627EMLSAE00000001627-710555Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779972auto779972Lepeophtheirus salmonispolypeptide
EMLSAP00000000350EMLSAP00000000350Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000350

>EMLSAP00000000350 ID=EMLSAP00000000350|Name=EMLSAP00000000350|organism=Lepeophtheirus salmonis|type=polypeptide|length=515bp
MDGPSKNDIAHIFKRLKSQSANKVCFDCGSNNPTWSSVTYGIFICIDCSG
IHRSLGVHLTFVRSTVLDCNWTWVQLRQMQLGGNAGAKAFFQQYNTLTSD
VQVKYKSRTAQLYREKLHNAAVQAIKIHGSKLFIESAAVAPEKETEDKEV
DEDFFTQNHSNPLPENINDLEYLGQLPKLSDTIKKEVVDPTEGPNVDGIH
ASTVQAPRKSTIMNKRSSAKKGGLGAKKLGGGLGATKVKKDFSEIEKEAE
MADQIRSKMADESTKKVDEEEITSSMRLAYHDISVQQKKKEDNLKKTDPK
KAEQVERLGMGFRASSGVSHSLMSDTITIVQEEPSGYKKQNNLFVDRSSN
YMDDIDTNNDDNMFKGFSDPMISWESEFEKLKMEKNTTKDKGSWGNSFSN
SSSNRSSSKVHSYNGASSVEASKKFGEAKAISSDMFFDNDRNDSQDANLN
RFQGSXSISSADYFNRTEVTPGSRIQSPDMEDVKESVRQGVTKVASKLSG
MASGVYSQIQEKYGY
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mRNA from alignment at LSalAtl2s104:877817..880136-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000350-696197 ID=EMLSAT00000000350-696197|Name=EMLSAT00000000350|organism=Lepeophtheirus salmonis|type=mRNA|length=2320bp|location=Sequence derived from alignment at LSalAtl2s104:877817..880136- (Lepeophtheirus salmonis)
AATCATCCCTTGGGAAGTGGACCCGTAGATTTTCCTACCAACATGGATGG
ACCCTCTAAGAACGACATTGCCCATATCTTCAAACGCCTCAAGTCCCAAT
CCGCTAATAAAGTAAGTGTTGCCCAACCCTTATTTTTGAGAGGGAGCCTT
CCCTTGATTGTGTGATGAGCCACGTCATCCCTCCTTCCTCTTTTTCTACT
TGTAGGTTTGCTTTGATTGCGGCTCCAATAATCCCACTTGGAGCTCCGTG
ACCTACGGGATCTTCATTTGCATCGACTGCTCTGGAATTCACCGTTCTCT
GGGGGTGCATTTGACATTTGTGCGCTCCACCGTCCTGGATTGCAATTGGA
CATGGGTTCAGCTACGACAAATGCAATTAGGGGGCAATGCGGGGGCAAAA
GCGTTCTTTCAACAGTATAACACTCTCACTTCGGATGTGCAAGTTAAATA
CAAGTCTCGCACGGCACAACTCTATCGGGAGAAGCTTCATAATGCTGCTG
TTCAAGCCATTAAAATACATGGAAGCAAACTCTTCATTGAGAGTGCTGCC
GTGGCTCCGGAGAAGGAAACTGAAGACAAAGAGGTGGATGAGGATTTCTT
TACGCAAAATCATTCCAATCCCCTTCCAGAAAACATTGTAATTATGCATC
TTTCTTTTACTTCATCCAAGCAATATTTGGATTTTATTTTTATTTATCTT
TGTATGAGATATAGTTCATTAACTATATAGTGATCTTTTTTTTTATCTTT
TAAATTGTAGAATGATTTAGAATATCTCGGTCAATTGGTAAGATATATTA
AGTTCAGTATTACTTGCAAGTGTTTGTATATGTTATTAATACTTATTCTA
CAAAACCACAAGTTTGTTTGACTTRTTTATTTAAAAAAAAAAAAAAAATG
TATAAAAAAGTGCACATCAGATTATTTTATATCATATAAGTAATTCAGCT
CGTAATTTTTCTGATAATTTCAATCTATTTATATATATAAATATATATAA
TGTCTCTTTTTCTTAATTTTCAGCCAAAACTTTCAGACACAATTAAAAAA
GAAGTAGTTGATCCAACTGAAGGACCTAATGTAGATGGCATCCATGCATC
AACAGTGCAAGCTCCACGAAAATCCACCATTATGAACAAGAGGAGCTCTG
CTAAAAAGGGTGGCCTCGGAGCTAAAAAACTTGGTGGAGGATTGGGAGCA
ACCAAAGTCAAGAAGGACTTCTCAGAAATTGAAAAAGAAGCAGAGATGGC
TGATCAAATTCGTTCCAAAATGGCAGATGAAAGTACTAAGAAAGTCGATG
AGGAAGAAATAACTTCATCCATGAGATTAGCCTACCACGATATATCCGTC
CAACAAAAGAAAAAAGAAGACAATTTGAAAAAAACTGATCCTAAAAAGGC
TGAACAAGTTGAACGTCTCGGAATGGGGTTCCGGGCTTCTTCAGGAGTCA
GCCACTCGCTAATGAGTGATACGATAACAATTGTTCAAGAGGAGCCTTCT
GGGTATAAGAAACAAAACAACTTATTTGTTGATCGGTCTTCCAACTATAT
GGATGATATTGACACTAACAATGATGATAATATGTTTAAAGGATTTTCTG
ATCCCATGATTTCCTGGGAAAGCGAATTTGAAAAACTAAAAATGGAAAAA
AATACAACTAAGGATAAGGGCTCTTGGGGCAATAGTTTTAGTAACTCGTC
TTCCAACAGGTAGATCTAATTTGTAACCTTTTTAGTATCAAATGATCTAT
TAATATTTGTCAGGTCGTCCTCTAAAGTTCATTCTTACAATGGTGCGTCA
TCAGTGGAAGCTAGCAAAAAATTTGGTGAGGCAAAGGCAATTTCATCGGA
CATGTTTTTTGACAATGATCGCAATGTAAGTAGTCACATTCATTGATGAT
TTGTGCTTAAGAGCTTTACAGAGATAAGATTAGATAGATATCTGTAGTGA
AAGTATGTGATACTGGATGATTTCCATTGATTTTATTAATATAATGCAAT
TTATCTAATCCTGTTTTTCATCCATTAGGATTCTCAAGACGCTAATCTCA
ACCGCTTCCAAGGATCAAKCTCCATCTCCTCTGCCGATTATTTTAACAGA
ACGGAGGTTACTCCCGGCTCACGTATCCAATCTCCAGATATGGAAGATGT
TAAAGAAAGTGTAAGACAAGGTGTGACTAAGGTTGCTAGTAAATTATCCG
GAATGGCGTCTGGGGTCTATTCGCAAATACAGGTGGGTTCAGTGTTGTAA
AGGTCCCGTTTACTTATTTACATAATTAATTATTATTTGCTCTTCATTTT
AGGAGAAATACGGTTATTGA
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