EMLSAT00000000412, EMLSAT00000000412-696259 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000412
Unique NameEMLSAT00000000412-696259
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1064supercontigLSalAtl2s1064:46446..49236 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000412 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000412EMLSAG00000000412-683178Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001827EMLSAE00000001827-710755Lepeophtheirus salmonisexon
EMLSAE00000001828EMLSAE00000001828-710756Lepeophtheirus salmonisexon
EMLSAE00000001829EMLSAE00000001829-710757Lepeophtheirus salmonisexon
EMLSAE00000001830EMLSAE00000001830-710758Lepeophtheirus salmonisexon
EMLSAE00000001831EMLSAE00000001831-710759Lepeophtheirus salmonisexon
EMLSAE00000001832EMLSAE00000001832-710760Lepeophtheirus salmonisexon
EMLSAE00000001833EMLSAE00000001833-710761Lepeophtheirus salmonisexon
EMLSAE00000001834EMLSAE00000001834-710762Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770538auto770538Lepeophtheirus salmonispolypeptide
EMLSAP00000000412EMLSAP00000000412Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000412

>EMLSAP00000000412 ID=EMLSAP00000000412|Name=EMLSAP00000000412|organism=Lepeophtheirus salmonis|type=polypeptide|length=671bp
MSELIEIDPMDFQIRDGFYSSPSMDDTHGPTSDRSQKSLDMERRPPSLDD
FLKILGNPGRYQIVVLILLATNYIPVAVNHLLMAFYAVSTQHHCRWGLVC
DRKYVGPLVTTIYFTGVMIGGVIFGYLSDRFGRKSVMLLCLYTQCLIGIA
LHFVRRLVIFMGLRFIQGVFIQGLQSSTYSMVIELFSPQYRTLAGCVVEG
FWATGIILLALIAKYVQHWRYIQLAINIPTIATIFYIWIIPESVRWLLSK
DKLKKAESIVRSIASYNSLRLDSSWLRNEMETVVRELRRLSPTSPGIKDL
LMKPKTRRNSFSLFFIWLSVSLSYYGITYSIPDLSGDIHLNFMIGGGIEL
AAYLFAFVVFNGFGRKYPLVCYLFVSGLICISIVIIKKFVSPKSVDTQGL
SIGLALMGKATVVSSFCGIFIYSSEXXXXXXXXXXXXXXXKNRIAHCATI
TXVENPQLLTFCAFGGLSFIAAFLTIFLPETYNAALPDTVTEANILGRPT
QPSINSSYDITKNKSELYSDVGYGKSPEWVEVDGMIVSRDLNDGGFRDRQ
EFSTLSSTGDRSSAFSRMTQEVIYETINSSSSPEISPSLRRPLPRPPHPI
KEQESKDSILFHRHHGTDIPSSTCSSPSPIGGGNYYTMDPTLTSLGDLSN
PDSLEVESNGPYPSRDYETKL
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mRNA from alignment at LSalAtl2s1064:46446..49236-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000412-696259 ID=EMLSAT00000000412-696259|Name=EMLSAT00000000412|organism=Lepeophtheirus salmonis|type=mRNA|length=2791bp|location=Sequence derived from alignment at LSalAtl2s1064:46446..49236- (Lepeophtheirus salmonis)
TCCAATCAAATATATCAAATGTCGGAACTAATTGGTTCGTTAATATCTAC
AATTACTATTTATGTATTCACCACAAATAATTTAATTACATATAATTCTC
CATAATTTTACAATCTTAGAGATTGACCCAATGGATTTTCAAATCCGAGA
TGGGTTCTACTCATCTCCCTCAATGGATGACACTCATGGKCCTACCTCTG
ATCGCTCACAAAAGTCTTTGGATATGGAACGTCGTCCTCCTTCACTAGAT
GATTTTTTAAAAATCCTTGGTAATCCAGGAAGATATCAAATAGTTGTCTT
GATTCTTTTGGCGACAAACTACATTCCTGTTGCTGTAAATCACCTTCTCA
TGGCATTTTATGCCGTATCAACTCAACATCATTGTCGTGTAAGATCAAAA
TGATTAGTATTATTTAACTAATTTAAAAATATCATTTATTAAACCAATCA
TAGCCTTTAGGCAAGCAAGAATTTAATTACAACAATATAACCATTCAGAA
TGTCGTCCCCATAGCKCCCCCTCCGCCTCCAAATTCTCAGTGCGAGATGT
GGATAGANTCCAGGAAACACCAGTAAAGGAACACAGTCCTGCATCAATGG
CTATGAATTTGAATTTGACAACAATGAGTGGACAATTGTAGCAGAGGTTA
GATCCGACTGTCAAACATATTATCATTGTGCTAAATGCTTGTTCTTTCCT
ACTCCTAGTGGGGCCTTGTTTGTGATAGAAAGTATGTTGGTCCTCTGGTC
ACAACGATTTATTTCACTGGAGTCATGATTGGAGGTGTTATATTTGGGTA
TTTGTCTGATCGCTTTGGAAGGAAAAGTGTGATGCTCCTATGTTTGTACA
CCCAGTGTCTCATAGGGATCGCACTCCATTTCGTGAGACGTCTCGTTATA
TTTATGGGGCTAAGATTCATACAGGGAGTTTTCATTCAGGGTCTTCAAAG
CTCCACTTATTCAATGGTTATTGAACTTTTCTCTCCTCAGTATAGAACAT
TGGCTGGRTGCGTTGTCGAAGGTTTTTGGGCAACTGGCATTATTCTTCTT
GCTCTCATTGCCAAATATGTACAACATTGGCGATACATACAATTGGCCAT
TAACATTCCAACCATCGCAACAATATTTTATATTTGGTATGTTTTATGAA
AAAGCTAATCTTGCGTGAGCCTCACTAATTGTAATTTAATTATCAAGGAT
CATTCCTGAGTCCGTGAGATGGCTTTTGTCCAAAGATAAATTAAAAAAGG
CTGAAAGTATAGTGAGATCTATTGCATCATACAATTCCCTTCGTTTGGAC
TCAAGTTGGTTACGAAATGAAATGGAGACTGTAGTTCGAGAATTAAGGCG
GTTATCTCCTACATCCCCCGGAATAAAGGACTTACTCATGAAGCCCAAAA
CTCGTAGAAATTCATTCTCACTCTTCTTTATTTGGTAAGAAATCTAATTA
CATAATTAATACATGAGAAATATGATTGTGAGGATTCTCTCTTTCATGTA
TATCTTCCTATTAGGTTATCCGTCTCATTATCCTACTATGGAATCACATA
CTCAATACCAGATCTTAGTGGCGACATTCATCTTAATTTTATGATTGGTG
GGGGGATTGAGCTTGCAGCTTACCTTTTTGCCTTCGTAGTGTTTAATGGA
TTTGGTAGAAAATATCCATTGGTGTGTTATCTTTTTGTATCTGGACTGAT
TTGTATCTCCATAGTTATAATTAAAAAATTTGTATCACGTATGTTGATCA
TATGAATACGATATGAATAGTCTATTAATTATTTAAAACTCTATTAATAG
CAAAATCAGTGGACACTCAAGGTCTCTCAATTGGTTTAGCTTTAATGGGC
AAGGCAACTGTTGTATCAAGTTTCTGTGGTATTTTTATCTATTCCAGTGA
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGA
ATAGGATCGCTCATTGCGCCACAATTACTCMTGTTGGTAATGCATCTTGT
ATTAATAATTAATTATCGATAAAAAGTCATTTCTTATGTATGTATATCAA
AATCTAATAGTGCAAATACTGGTATCCAGAAAATCCTCAATTACTCACTT
TCTGCGCTTTCGGAGGTTTATCGTTTATTGCTGCTTTTCTAACCATATTT
CTGCCAGAAACTTATAATGCTGCTCTCCCAGACACAGTCACTGAGGCAAA
TATATTAGGAAGACCGACACAGCCATCTATAAACAGTAGTTATGATATAA
CTAAAAACAAGTCTGAATTATACAGCGATGTTGGCTATGGCAAAAGTCCT
GAATGGGTTGAGGTTGATGGAATGATAGTTAGTCGGGATTTAAATGATGG
AGGTTTCCGTGATAGGCAAGAATTTTCTACACTTTCATCCACTGGAGGTA
GTTATCAAAAACCTTTTAATTATAATGACATAACACAAATTCTTTACTTT
CAGATCGCTCGAGTGCATTTTCAAGGATGACACAGGAGGTCATATACGAA
ACAATTAACTCCTCTTCTTCACCTGAAATCTCTCCAAGTCTACGAAGACC
CTTGCCCCGACCCCCACATCCCATCAAAGAACAAGAAAGTAAGGATTCTA
TATTGTTTCACCGACATCATGGTACAGATATACCTTCATCTACTTGTTCA
TCCCCTTCACCGATAGGGGGAGGTAATTACTATACTATGGACCCTACACT
TACATCTCTTGGAGATCTTTCAAATCCTGACTCGCTTGAAGTAGAATCAA
ATGGTCCCTACCCATCCAGAGACTATGAAACTAAACTTTAA
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