EMLSAT00000000432, EMLSAT00000000432-696279 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000432
Unique NameEMLSAT00000000432-696279
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1068supercontigLSalAtl2s1068:354081..357686 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000432 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000432EMLSAG00000000432-683198Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001916EMLSAE00000001916-710844Lepeophtheirus salmonisexon
EMLSAE00000001917EMLSAE00000001917-710845Lepeophtheirus salmonisexon
EMLSAE00000001918EMLSAE00000001918-710846Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776771auto776771Lepeophtheirus salmonispolypeptide
EMLSAP00000000432EMLSAP00000000432Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000432

>EMLSAP00000000432 ID=EMLSAP00000000432|Name=EMLSAP00000000432|organism=Lepeophtheirus salmonis|type=polypeptide|length=72bp
MSSYKNYIGIIGKIRGKETYCAIRAGLQFPVRRIHRLLRKGNYSATMKYL
TAQVMYCCRNNKKTPSSPIGDS
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mRNA from alignment at LSalAtl2s1068:354081..357686+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000432-696279 ID=EMLSAT00000000432-696279|Name=EMLSAT00000000432|organism=Lepeophtheirus salmonis|type=mRNA|length=3606bp|location=Sequence derived from alignment at LSalAtl2s1068:354081..357686+ (Lepeophtheirus salmonis)
ATGTCGTCGTACAAAAAGTAAGGGGGCAAAAGAAAGAATGAGACAAACAC
TCACGAACCCATTCAAATGAATAACTCCATAATATGAAGGGGCGGCCGTA
GGGGCKGCCCCCCTCCCMCAAAAAAATAAATAAAATAATTTTAGCTTTTT
ACTAGAAAATTTGATTTTTGATTTTTTCCAAATAATTTAATATTTGAAAT
TTAATCTAATTTTACAAGTAAGAAATTATCCAAAAAAATAATTTTTCAAT
TTTTTTTCAAAAAATTTTTTTGTCCGAAAATAACTATGGATTTTTGATTT
TGTTTTTAGAAAAAATTTAATATTTGAAATTTTTGGTGAACAGCTGTGGA
TTTTCAATTCTTTTTTCCGTAAATTTCATATTTGAAATTATTTTTGTTCA
GATCTGTGAATTTTTAAACCTTTTCTTTGCAAAAAAAAATATTTTGTACA
AATAACTATGGATTTTTCAAATAATAAATTGTAAAAAAAGAACCCCCCCT
CCCACAAAAAGAAATTATAATTATATATATATTTATACTCCTACGGACGC
CCCTAACGAGGGTGTTCTGAAAAGTTTCCAACTTTTAGCGTGAAGACGGT
AGCACAACAAAATATTGGCTMRTTCCATCTATCTATCATTTGTTGACAGT
AACCATCAAATTTTCAGCCCTTTCGACGTGTGGTTCTTACGTAACAGTCG
TTTTCGAGTGACTTAATGTGAGTGTTTTTGTGAAAATGTACAAAATTGAG
CATTGAGCTGTCATTAAATATATTATTTTTTTTTTTGCATAGTGTAACCT
TTAAATAAATTCAAACAATAGCAGATATATACATAAAGACTATTTGTGTT
AAAATTTGACGCGTCAAAGTGAATCCATCTAGGAGTAATTGAGCCAAACC
CCAGAGTACTATTTGGACAGATTACAGAGATGAAAGCATTCCTGGTAGAA
GTTATTAGAGTTACAAGGATACAATGATAAAAATAAAACTTCAGAAAAAA
TGTCTTGTATCTTTGTAAGGTCGGAAACTTTTCAGACCCCCTTCGCATAA
GTGACTGCCTTTCAAAATTAAGGTGGTAGAAACTAATGAAATATCAGCCT
TCAGCAAAGATGTACTATTTTTTAATAGAACTAAGAATGAGAGCAGAGCG
GGCAGAAGACTCAAGGATAGCAACTTAATTTGTGGCCGGGAGGCCGTTTT
GTACATTAGAAAATAAGTTGGGAAGAGGATGGGGKCATTGAAAGGAAGTT
ACATCCGTAAGAGCAGTGCYCCCCGAGTAACANCAGCCGATGGTGATAAA
ATTCAATAAATACTTAGTTTTGTATCAATTAAATATGTTGCCCATCTACA
CAAAAGCAAGCTTGAATGATTTTTCTCAAAATTGAGTATGGAATTCATGT
GTATTCTTATACGAATTATTATCATTAATTTGTTAACAACAAAATATTCA
TATTACTCCTTTGAGTGTGTAGCAAATTACACTCTTAAACTAGGAATTAA
AAAAAATAACGAGAAATTGACTAATATAAGTCCTTTCAATCAAATAAAGG
TTGTTAACTATCACAATAGAGAGAGCTAGAATGTGTTTTTTTTATAAAAA
TGGAATGTTTGTATTGTTTGACAAATAATCATTATCAATTTATAGCAACA
AATTATTCTTATTTACCCTTTGAGTGTGTCCTAAATTCCACTTAAAGTAA
CAAAAATTGATTGTCACAATTAAACAAATGCAAAATGGATATTTTTTATA
GGAAAGATCCCATCTTGGGCCTAATATAAGCCTCTTCAGTAAAAAAAAAG
GGACTAAATTATAGCTAAAATTCTTGAATATCCCAACTCTTCCCTTAAAT
TTGAATAATAAGCCTAGAGTTGACTCAAATACCGCCCATAAAATGAATCT
TCTCAAAACTAAGTGTGAATTATATTCTTATTTTTTGACAAATTATCGTC
AATTTTTGACAAATTCTTACTATTCACCCTTTGGGTGCATCGCAAATTGC
ACATTATGTAGAGAAAATTGGTCGTCGCAATTAAAGAACTGGAATTTGCA
CTTGGAAGAGAGCAAAACCTCGACGGTTTCATCCATTATTTACTTGCTTG
AGCGTACAGAGCGAGGCTCGTCATTGGCACCTTCTCAGACACCTTGGAAG
AGATTCTACGACTTGTTGAACATATTTTTTTCTTTACTCAGAAAAGTTTC
ACTGTATGCCACTATCTACATTTCAAGTGTCTAGGAGCACTTAATTTCAT
TTTTTACACAACATTTGATGCAAATTCCATGCTTTTCAATAGCAAAAATC
GCCAAACACGCAAAATACTTGTAGGCGTTATGCCTTTCACAAACAAACTA
TACATATTATATAGCTGAAACAGTTAATATATGTTGGTGACGAGTATATA
TATATCAAATGTATCTTGCCCGCGAAATTTGAAAAGTCATCTTACTTTAT
GAATACACCTCATACATAAATTAATAGTTTCCACCCGGTATAGATATATA
CGATATTTAGAATCATAAGTAGGACCTCGTACCTACCTATTTGACTTAAT
TATCATTTACAATCTCAACAAAGAGTATGTACATATTATTATAACTATAT
AAGTATAATATAATCAACGTGTGGGGCTCTTTTAACTTCTTCTTCGTGTA
TCAAACTGTCATATCTCCTTTTTTTTTATATAGTGTGTGTTACTTTGTTA
TAATAGGTCTACCTACATACCTATAAGTATACAGATCTATTACCCATGTA
TATATGTACTATCTAGGTACCTTAAAAATCATGTTTAATTCTTTATTCTC
TTCTTCACCTTCAACCATTTATATATTTATTATATAGTTATATAGGTAAG
TGTGTACTAGTCATGGACTGAGTTTGAAATGCATGTATACCTACATTAGA
AAGGGGCATATTTTATAAAATATTTAAGTAGATACATAGAGGCGTGACCA
TTACGGGTACGAGATTTGTTTTTAGTTGTCAATCTGAAGAGTGTTTTTGT
ATGTTTTTCAAAGATTTTATCATTGTTCTTTCATTCTTGAGGAGGGAACA
TCAAAGTATAAAGTAATCACTAGWGCAGGAACAGYGGAGTTYGCAAGATT
ATATATATATATATATATACTTTTTACCTTTCTGCCTTCCCCTCACAAAA
TTGATCTTATTTAAAATGGGAGGGAGTCCATTATTTTTAAATTATTAACA
TACTATGTAGGTATATATTATATATATCAAATTTGGAGGATCAAAGATTG
GGGTGGTTTCTCTATCCCTCGTAACCTCTCTCTAATTTACCATATGAGTG
ATTCCATTTGATTAAATTTTACATATTATATACACAGTTTATCTTATAGA
TTCAGAGACATCGTTGTTCAGAAAAGTCTTAGTTTAATTTAAATGTATCA
TATCTGGTCGAGGTATAATTGGAAAAATTAGGGGAAAGGAAACTTATTGT
GCCATCCGTGCTGGTCTTCAATTCCCTGTTCGTCGTATTCATCGTCTTTT
AAGGAAAGGGAATTATTCTGCTACCATGAAGTACCTCACTGCGCAGGTAA
TGTATTGCTGTCGTAACAACAAGAAGACTCCGTCATCTCCGATTGGTGAT
TCCTAA
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