EMLSAT00000000525, EMLSAT00000000525-696372 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000000525
Unique Name	EMLSAT00000000525-696372
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1081	supercontig	LSalAtl2s1081:184291..188961 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000000525 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000000525	EMLSAG00000000525-683291	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000002275	EMLSAE00000002275-711203	Lepeophtheirus salmonis	exon
EMLSAE00000002276	EMLSAE00000002276-711204	Lepeophtheirus salmonis	exon
EMLSAE00000002277	EMLSAE00000002277-711205	Lepeophtheirus salmonis	exon
EMLSAE00000002278	EMLSAE00000002278-711206	Lepeophtheirus salmonis	exon
EMLSAE00000002279	EMLSAE00000002279-711207	Lepeophtheirus salmonis	exon
EMLSAE00000002280	EMLSAE00000002280-711208	Lepeophtheirus salmonis	exon
EMLSAE00000002281	EMLSAE00000002281-711209	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto774082	auto774082	Lepeophtheirus salmonis	polypeptide
EMLSAP00000000525	EMLSAP00000000525	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1081:184291..188961+

protein sequence of EMLSAP00000000525

>EMLSAP00000000525 ID=EMLSAP00000000525|Name=EMLSAP00000000525|organism=Lepeophtheirus salmonis|type=polypeptide|length=781bp
MTTYQEYIQQNEDRDGIRLTWNVWPSSRIESTRMVVPLGAFYTPLKERLD
LPPIQYDPVLCARSSCKAILNPMCQVDFRAKLWVCNFCFNRNTFPPQYAG
ISEQNQPAELIPQFSTIEYTLTRAPTLPPVFLFVVDTCLDEEELNALKES
LQMSLSLLPANALVGLITFGKMVQVHELGCEGISKSFVFRGTKDYSAKQV
QDMLGLGRGPAPQRMPQTNQPKTTPQAPVNRFLQPVQSCDMSLTDILEEL
QRDPWPVSQGKRPLRSTGVAMSIGVGMLEASFPNCGARIMMFVGGACSQG
PGQVLNDELKFPIRSHHDIDKDNAKYMKKATKHYEGLSARASHNGHAIDI
YSNSLDQTGLMEMKSCSNHTGGHMVMGDSFNSSLFKQTFQRVFNKNAKED
FTMAFNATMEVKCSRELKVSGAIGPCVSTNKKDNCVSDVVIGMGGTNAWK
FCSLSPSSTVALIFEVVNQHGAPIPQGGRGXIQFITHYQHSSGQRRIRVT
TLARNWADPQTAIQHIQASFDQEAAAVLMAXMAVWXAETQEDGPDVLRWV
DRTLIRICQKFGEYHKEDPNSFRLPDNFTLYPQFMFHLRRSQFLQVFNNS
PDETSFYRLCLMREDLTQCLIMIQPILYAYTFNGPPEPVLLDTSSIQPDR
ILLMDTFFQILIFHGENVAQWRNSGYHNLPEYENFKNLLDAPVSDASEVL
QTRFPVPRYISTEQGGSQARFLLCKVNPSLTHNNAMYGSEAGVSMFGGGN
ASDGGAPVLTDDVSLQVFMEHLKKLSVSAQS

mRNA from alignment at LSalAtl2s1081:184291..188961+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000000525-696372 ID=EMLSAT00000000525-696372|Name=EMLSAT00000000525|organism=Lepeophtheirus salmonis|type=mRNA|length=4671bp|location=Sequence derived from alignment at LSalAtl2s1081:184291..188961+ (Lepeophtheirus salmonis)
GTTGACAATCGATAAATTAATGGTGTAGTTTTTGCTTAGTTTAATACAAA
GTATAATTACATATATGTTGAGACATGGAAGAGTTGTAAATACCACATAA
TTATAAAGGATCAAAATAAAATGATAGTATCAATGAATACTTGGTAAAAT
AATGTATTTCAAATTGAAGAAGTAAGAGATGGTAGCAATATATATATATA
TATATATGGAAAGAGAGCGCGAGAGTGAGAGACGGAGCTGAGTGAACGCA
ACCTCGCTTTCAACTCACGTCACGCTGACGTGGCTTTTACATTGACGGCA
AATCCTCTGATAAAAGTTCGTGAATTCCCTTCTAAATCCTTCTTTTGGGG
GTAGACTGCGTTATTCCTTGAGCTAATTACTTATAATAATGACGACCTAT
CAAGAGTATATTCAACAAAATGAGGACCGAGACGGAATTCGACTTACTTG
GAATGTTTGGCCTTCATCGCGCATTGAATCCACTCGAATGGTCGTTCCTT
TGGGAGCTTTTTACACTCCTCTGAAGGAAAGATTAGGTAAAGGCTATGTT
TTTATTGTTAAATTGCATTCCATTACTGTCTCTGCTTCTAGATTTGCCTC
CCATTCAATATGACCCCGTCTTATGTGCTCGATCCAGCTGTAAAGCCATT
TTGAATCCAATGTGCCAGGTTGACTTTCGTGCAAAATTATGGGTCTGCAA
TTTTTGTTTCAATCGCAACACATTCCCTCCACAGTATGCGGGGATTTCTG
AGCAGAATCAACCCGCAGAACTGATTCCTCAATTCTCTACAATTGAGTAC
ACTCTTACTCGTGCGCCAACTCTACCTCCCGTCTTCCTTTTTGTCGTAGA
TACATGCCTTGATGAGGAAGAGTTAAATGCACTTAAAGAGTCTCTTCAAA
TGTCCTTATCCTTGCTTCCTGCCAATGCTCTGGTTGGTCTTATCACTTTT
GGAAAAATGGTTCAAGTTCATGAGTTAGGCTGTGAAGGAATATCCAAGAG
CTTTGTTTTTAGAGGAACTAAGGACTACTCTGCGAAGCAAGTTCAAGATA
TGCTTGGTCTAGGACGAGGTCCAGCTCCACAGAGGATGCCACAAACAAAT
CAGCCTAAAACAACTCCCCAGGCACCTGTGAACAGGTATTTTAAGTTTAA
TTACTTCCTAGAAAATCGTTTTTAATTATTTTTGTTCCTTTAAAGATTTT
TACAACCTGTTCAATCCTGTGATATGAGTTTGACGGATATTCTTGAGGAG
TTGCAGAGAGATCCTTGGCCTGTTTCTCAAGGAAAACGTCCATTAAGGTC
AACTGGTGTGGCTATGAGTATAGGTGTTGGGATGCTTGAGGTAAATTTAT
GTATAATACTCTACAGGGTCCGCGAAAATTATGTTGAATTATTTTTTAAT
TCGTATAAATATGCTTAAGTTGAGGGATTGTTGTTCAAAATCATGTTCTA
ATGGTTCTAGTTGCAACTCCTAACACGAATGTGAAGACCATGTTGATGTT
TTAATAAAAATGGTTTGTGACTCATGCTAGTCACTCCTATGCAGACTTAA
ATCCGTTGTGAAGGCAAAAGGTGGCCTTTTTTTAATTAAATTTTGTATAG
ATGCTTTAATATTAACTTTGGTATTTCTGAGCATTAAGCTTTTTGCAAAT
CAAACAATTATGTTATTGAACCAAAAAAGAAAAAAGAAGTAGTTTCTGTG
GATCCTGTATTTGCTTCATGTTTTGAAGCTACATAATTTAAAGAATATAA
TTGGGTACAATTAATGCTAAATTTGACAAGTAATTTAAGGTTTTTTATAT
ATTTGAATTTTATTTTTAATGCAATTATGAAAAATCTTATCTATAAGTGC
ATTTGTATACATACTCTTACGGAATATATCTTCTTTTCTTTTTTTTTACA
GTAATTAAGTATGTTTATATTCATAATATAAGTGTTGAGAAGGAACTCTT
AATTTCAAAGTAAATCATTTAATTACATCATTTTTTAAGTTTAATTTGAT
AAATTACTTGATACGCTATATTTTATCGAACCTTAAGCTCTTTTTTTTAT
TCGTAAATTTAAATTTCATACATAATTTTTGATTCATTTTTAGGCATCCT
TTCCAAATTGTGGTGCTCGTATTATGATGTTTGTTGGAGGAGCATGTTCC
CAAGGTCCTGGCCAAGTACTCAATGATGAATTGAAGTTCCCTATTCGCTC
TCATCATGACATTGACAAGGATAATGCGAAGTATATGAAGAAAGCCACTA
AACATTATGAAGGTCTTTCTGCTCGTGCTTCTCACAATGGGCATGCAATT
GATATTTATTCTAATTCTTTGGATCAAACTGGTCTCATGGAAATGAAATC
TTGTAGTAATCACACAGGAGGTCACATGGTTATGGGAGATTCTTTTAATT
CAAGTCTTTTTAAGCAAACATTTCAACGTGTTTTCAATAAAAATGCCAAG
GAAGATTTTACGATGGCTTTTAATGCTACGATGGAAGTTAAGTGCTCTCG
TGAACTCAAAGTTTCTGGAGCAATCGGCCCTTGTGTGTCTACTAATAAGA
AAGATAATTGTGTCTCCGACGTTGTTATTGGAATGGGAGGAACGAATGCT
TGGAAGTTCTGTTCTTTATCTCCTAGTTCAACAGTAGCTTTAATTTTCGA
AGTAGTAAATCAACATGGCGCCCCTATTCCCCAAGGCGGTAGAGGTTGKA
TTCAATTTATTACACACTATCAACATTCCTCTGGCCAGAGAAGAATAAGA
GTTACGACTCTTGCTAGGAATTGGGCTGACCCTCAAACTGCCATTCAGCA
TATTCAAGCATCCTTTGATCAAGAAGCAGCTGCTGTCTTGATGGCTCSAA
TGGCTGTTTGGRGAGCAGAGACTCAGGAAGATGGTCCTGATGTTTTGCGT
TGGGTCGATCGAACACTCATTCGAATTTGCCAAAAGTTTGGGGAATATCA
CAAAGAGGATCCAAATAGCTTCCGTCTTCCTGATAACTTTACACTTTATC
CTCAATTTATGTTCCATCTTCGCCGTTCGCAGTTTCTCCAAGTGTTTAAT
AATAGTCCTGATGAAACTTCATTTTATCGTCTTTGTTTAATGCGTGAAGA
TTTGACACAATGCTTGATTATGATTCAACCCATTTTGTATGCTTATACAT
TTAATGGTCCTCCGGAGCCGGTTCTACTTGATACATCATCAATCCAACCT
GATAGAATACTCCTTATGGACACATTCTTTCAAATACTTATTTTTCATGG
AGAGGTAAGACATCATCCCATATAAGGAAGTTTGCATGTACATTACATAA
GTTTATATTCTTTTACCGAAAACAGAATGTTGCTCAATGGAGAAATTCAG
GATATCATAATTTGCCCGAATATGAAAATTTTAAAAATCTTTTAGACGCC
CCTGTTTCCGACGCATCGGAAGTTCTTCAAACACGTTTTCCTGTTCCACG
TTATATTAGTACAGAGCAAGGTGGCTCTCAAGCTAGGTTTCTTCTTTGCA
AAGTCAACCCCTCGTTAACACATAACAACGCTATGTATGGCTCGGTAAGT
TTTAAAGAGAATCTATAAAAATGATTCAATAATTATTATTGAGTAATAAG
GGGATACCCATAAGATTGTTTTTACCCATTCATTTATATCATATTTATGA
TCATTTAAATAGGAGGCTGGTGTTTCCATGTTTGGAGGAGGAAATGCATC
GGTAAATAAGTTTTGAATAATGGTCTTAGGGTGTTCTATTCCTCTTTCTA
TTTTTATGTACAATATCTTATTTTTAAGGGTGAAGGTCATAAAAACATTT
CGAAAATCAAAATTTTAAATGTGAACTCTTTATATACATACTTTTTCTCT
TGTATTTTATAAAAAAAATTTATAATCATATGTACATATATATATATAAA
CGCATCTCTATTTTTGTCGTTGGGTTATTGGTTTTCGCTAATTAGCTATT
GGGACACGGTTTCCTTTTTTCCGTGTATGACCACAGAAGTGTAATAAATG
TATATCTTTTTTATTTAATCTAGGATGGAGGTGCTCCAGTTCTCACAGAC
GACGTAAGCCTGCAAGTGTTTATGGAACATCTGAAAAAGTTATCTGTGTC
TGCCCAAAGTTAAATTAAAGTTTTCGTGGAAGATAATTGCTATTATTGAT
TTATTAATTAATCTTTATTATTATTTTTTCTTATTTGTGAAATTTTAGAT
AAAAAAAAACAACAACTCACTATTGTTAGAAAAAAAACCAGAAGATTTTA
TTATGATATTGTTTTGATCAATAAAAATGATCTTGAATAATTTAAACATA
TTTCTTAGAATACATCTTATTTGAAAAACATGTTGACTGAAAAAGAAAGA
AATTATTTAACTTTTTGTTCGATAATAGTTATTTGATCAGAATATTTATT
TATTAGCACTTTGAATATCAGAATGAGATTTCCGTAGGTCCAAGCAATAA
TCTTAACCTTTTTTATCTCTTAATTTGATTTTTTCTCACATTAATAAAAT
TATCCATATTTGACAAATAATGTTAGATTCTACGTTTACAAGTGCAACAT
ACATTTTAGTTATGAATTTGTTTATTTTGAAAACTTGATTCGCATTGCTA
CACTTTTCCTTTGGATCTACAATTTAGTATCACCTGCCAACATATTTTTC
TACTTAGAATATGCCTCGAAG

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