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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1129 | supercontig | LSalAtl2s1129:222303..228722 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000783 >EMLSAP00000000783 ID=EMLSAP00000000783|Name=EMLSAP00000000783|organism=Lepeophtheirus salmonis|type=polypeptide|length=481bp
MHFSIPEIQELKEPKGGTYTSYSVHINGTFHCSLRYRQFHALHEQLKREF
LTGLPSFPPKKVFPLSEPQKEERRLLLEKYLQLVATDPRIASSIPFNGFL
LAAQRETRAFEENQDVSLDVYLMHDHKVTLKGPVLLQSDQVLEGVCAQLG
VPDEFVYYFALFLIQRHNNDSYSIVRKLQDFESPYISQKAMSGSLKLVLR
KCCWDPDIDSQLFSNQVTLNLLYIQTVTDVERGWVXASQDTKRTLSRMQA
RGAKLEYMDLARSLKFYGYIHFLPCCCDYPSTDTPVQVAIGMRELVIRLE
DPSTGEIKEGNFKVTKMRCWRIMTLTNPRDDDDNKLELSFEYLINNQTLQ
WVTIVSSQAILMSICLQSIVEELLRKKSRIHVKKAGEKSCTIEYSYPKRD
GSYHILPIRAGLHSKSCNKPTDSASVSNNKKNVSLSSLTGRQYSVKRLSE
KFDVVNMRDTLAAEDVFIENEAFVDIQDDEL back to topmRNA from alignment at LSalAtl2s1129:222303..228722+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000783-696630 ID=EMLSAT00000000783-696630|Name=EMLSAT00000000783|organism=Lepeophtheirus salmonis|type=mRNA|length=6420bp|location=Sequence derived from alignment at LSalAtl2s1129:222303..228722+ (Lepeophtheirus salmonis)
GCGGATCGGAGGAGTGTGAACACACGATGTAGTGTACAGCTATAGATTCA
GTACAAAAAAAAAGGTGTAGGATTCTATGCAATAGAAGTATAATTCATGT
AACATTTTACAGTACACTACTCGTTTCCCGAATCGAATAAATAATATTGC
ATAAAATATGGATATGATGGAGTGAGTGCTGCCGACTATATTATAAAAAA
TTATAAGAATAGCTAGCTCCCAAGCAGCTTACTCTCTTCTTCTGCTACGA
AAGAATTAATACATATCATAAAATGGGAAAAGAAGTGAAATTCTCAGCAG
CTCCCGTTACTTGTCTGTGTGTGTAGTTGTTGGTTGAATGGTTGTTGGGC
AGGCCAAGTCTTCATCACATACTCAGTATACATACATATATTAAAAAAGG
GAAAAAATATACTCTAAGACAAGAAAGAGGAGTATAGAAGAAGAGTGATT
CCGGTTCTGTCACTGCATACTTTCTCAAGAATGGATCTCTCCGCTACTGC
CACCGTCTGAATGAATCTTCGAAATGCATTTCTCCATCCCTGAAATTCAA
GAGCTCAAAGAACCCAAAGGAGGGACTTACACTGTAATTTCCACAATTTT
TATATTTATTTAACAATGTATTAAATCTATTTAACAATTTATTGAATGTA
CTTTTTCCCATTTTCAGTCCTACTCTGTTCATATCAATGGAACATTTCAC
TGCTCCCTTCGCTATCGTCAATTCCATGCCCTTCACGAACAGCTCAAACG
TGAATTCCTCACGGGACTTCCAAGCTTTCCTCCTAAAAAAGTATTTCCCC
TCTCCGAGCCTCAAAAGGAGGAGCGGCGACTCCTTCTGGAAAAGTATCTC
CAACTTGTAGCAACGGATCCTAGAATCGCATCTTCCATTCCATTTAATGG
ATTTCTACTCGCCGCTCAAAGGGAAACACGAGCCTTTGAAGAGAATCAAG
ATGTGTCGCTTGATGTATACCTCATGCATGATCACAAAGTCACGCTCAAA
GGCCCTGTACTCCTTCAATCGGATCAAGTACTCGAGGGGGTCTGCGCCCA
GTTGGGGGTTCCGGATGAATTTGTTTACTATTTTGCGCTCTTTCTCATTC
AGAGGCATAATAATGATTCGTACTCCATTGTGCGGAAATTACAGGATTTT
GAGTCTCCATACATTTCACAAAAGGCAATGTCTGGTTCATTAAAACTTGT
TCTTCGTAAATGGTAAGGGGAACGCGAATCATTTGAGCTAGTCCTTGATA
ACATCGTTATTTAACGCATGTGTAGTATCCAATTAGAAAAATAATTGTCT
TCTAATAATAGTAATGTCCCCCTGTTGTAATGTTCTATCAAAAGTATCAA
ATTTCAAAACATAACACCTACATATGCTAATTGCGGATTTTTATTCTCTT
CATGTGATTAAGAGGAGCGTAGCTGTGACTGTGTAATTCAGGCTTTGTGG
TTACCTAATAATGCATTATCATTCATTATGATTTGGCGCGCAAATATCAA
ATGCTGTCACAGATATTTAAAGCTCATTACGTCATACGGCAGAGTTTGAG
TCATTTTAATAGCAAATCCCTTCCAATAAATGTAGTAAATCGTTTCTTCT
GCATGTACAGAACTGAGAATCATAGTTTATAAAGCACCAATAATTGAGCA
ACAAAGGATAGTTATTATTAATTTTTCTCCTCTTTAAAAAAATTTAGAAA
TATTATCAACATTAATATCGTTAAGTCATTTTAATTACATATAAATTGGC
CCGTGAACATAAAAGCAAGCTAGAAGGGTTTTCGTCAAAATTGAGCCTGG
ATTACATTTATAGTCTTGCATGAAGTATTATCCTCAATTTATATCAACAA
ATTATTGTTATGAATTCGTTATAGAAGTCGTAAATCTCACTTAAAGTATG
AAAAAGTTATTGTTTTAATAAAATAATTAAAAACATACATACTTTATTGT
AAAGTATCATAGATCAAATATTTCGGCTATAGTTAATATTTTTGTCTATA
TCAATTCGTCCCAGGAGTTTGAATACGAAGCCTATAGTTGACTAAAATAT
TGTACATTTCTCTTTTTCTGAACTTTTGTTCAAGATTGTTTATCCATTTA
CTCACCATAAATATATTGTATACGCCATCTTCATAAGTGATTACTTAATA
CTCTGCTTCTGAATCATTCTTTTTTCTTTCTTTTTTTAGCTGTTGGGACC
CTGACATTGACTCTCAGCTATTTTCGAATCAAGTTACTTTAAACCTTTTA
TATATTCAAACGGTTACTGATGTTGAAAGGGGATGGGTAKAAGCCTCTCA
AGATACAAAAAGAACCTTATCTAGAATGCAAGCAAGAGGAGCCAAACTCG
AGGTACTCTTAGTAGTCTTTTGACTAAATTAATCTTCTAATAAACAATTT
TTTCCTTCCCAAAATTATTTTGTTTATCTAGTATATGGACTTAGCACGTA
GTTTAAAATTCTATGGATATATTCATTTTCTACCATGTTGCTGTGACTAT
CCATCAACTGACACACCCGTCCAAGTTGCTATTGGTATGAGGGAGCTTGT
AATACGTCTGGAGGATCCAAGTACAGGAGAAATAAAGGAAGGTAACTTTA
AAGTCACAAAAATGCGTTGTTGGAGAATCATGACACTAACGAATCCACGG
GATGATGACGACAATAAATTAGAATTAAGTTTTGAGTATTTAATAAATAA
TCAAACTCTCCAATGGGTTACAATCGTGTCCTCTCAAGCAATTCTTATGT
CCATATGCCTTCAGTCTATTGTAGAAGAATTACTTAGGAAAAAGAGTCGA
ATACACGTAAAAAAGGTAAATAATGTTCTACATAAGTAACCCGTCACCAC
AAAAGCGAGTCAGATTATGTCACATTTCTATTAATGAATTATTTTGATAA
GTCCTTCCGAGGGCCCGCAAATACCACTGTATGATTGATAAAAAATTATC
AATCAGATCATATCGGAACTAAACATATATCAGGTTGAGTAAAAAGTTCT
GAGCGTTTTTCACTAGATGTCTTTAGTGAACTATATCCCACGTTTAATAC
ATTGCATCAACAAAAGCTTAAAGATTAAGGGTACACTTTAAAAAAGTTCA
TTTACAATTTCGTGTTTGGTGGAGCCAGTTGTGTGTTACAGCATTCCAAA
ATGGGAGTAAAAAGAGAGAAAATACAATACATTCCTCAGTATTACTAAGA
CCAAGGAGAAAAGGTGGAGCAAGCGGGGAAAAAAGTTGTGCTGTTTATGG
ACTCAATACAGTATCGAATGCAAGAGCAAGTGATTCAAACGATTACGTTT
TGGTAAAATGGACCTCGAAAATGTTGATAAAATAATTGAAATTGTCGAGT
TGTACCGGAATGTGAGCACTTATTCAATTTACCAGGAACTGAAGATTAGC
CAGAAAACATTTTGGAACTATCTAAATCAGATAATTTTATTTTCAAAATA
AAGGAAATTAAGACCCCCAGAATATAGTAAATATTCTTAAGTATGTCAAT
AAGGGCTGTGGTTTTCCCTCCATATATTAGGTTTTAGTTTAGAAAATGTA
TAAATTTGGGTTTATCGTATATAATAAGCTAGTAAAGAACAATTCATGTT
ATTTTATTACAAAATATACTATATATTACAGATACGTTTGTAACCTTTTT
CAAACGTGTATGTTTTAAAACTTTTTTACATTCAAAGAAACATTTTCAAA
CTAACGTGATCCTTTGATCACAGTCCCTCCATACGTTTCAAAAATTTAGT
GTTTGAACTACTGTTAATATAAAACATTTGTGGAAGTTGCTAAATCGATT
TATGAAATATATAAAACATTTCTTCGATCGTATAAATACTTTCTAAAAAT
GTCGGGGGGGGGGCAGAAAGACAATTACAGTAAAAATAAATATTTAGATG
AAAATGTAATTTTCGTGTTTCTAAAATCCTTACAATATGCTCTTGAATCC
AAAAATTAAGGCTAAAATTGAAATTGTAACACGCCCCACGCCCTCTAAGT
AACATAAATGTTATGAATAGAGATTAAAGCATGGGGCACCACCCCTATGC
CCGCTATAGCCCGTTGGCTTCTTCTATGTCGCCCGCCAGACTTGTTCTAG
AAGTAACTTATATTTCTTGATTCGTTTATACTTATTTTTGAGCTGGTAGC
CTTCAAGCCTTTTGGGAATCTTAAAATAGCCCTCAGCTAGCTTTAAAAAA
GTTAGTAACCCCTAGATTAAATGAACAGAAAGAAAATATAACGAACCAAT
GAGGGTTACAATGTTAATTGATGAGAGTGAAGTAATTTTTGAATAAAAGT
AAGAAATTAACTCATTGTATTAATATTCATGTAGCCTCAAGTAAAATAAT
AAATAGGAAATGTCTCATATTCTTGATTTTTGTTCAAGATCGCTTTTGTG
TTGACACACTACATATGTATAATACTCCATCCCACGTAGGAATTATGTCA
TTTTGCTTTTTGCAGGCTGGAGAAAAGTCTTGTACCATTGAGTATTCTTA
TCCTAAGCGCGATGGATCATATCATATTCTTCCGATTAGAGCAGGATTGC
ATTCAAAATCCTGTAATAAACCAACAGACAGTGCCAGTGTTTCTAATAAC
AAAAAAGTAAGTATTCATCAGTCATTTACTGCCGGTTCTTCCAAATTTAG
TACATTAATTTTGTAAACAATTAATGTCAACAGCATTCCCAACATGTGTA
TCTCTATAGTTAAGTACGGATTTGATTCAGATTAAAACATGGATTTATGA
ATGTAGTAACTGCCAATTAAATTTCATTACGAGCTCAAAGCCCCATCCTC
GCGGAAACGTTTTCTGAGGAAAACTTTAAATATGTATCTTTTTGGGCTTG
CATCCCCTTTCGACATTCCATTTCACCTTAAACAATATTTTTTTGGAAAC
GGCTTCTAAAGAGGGGAAGGATCTGTTTGTGCAAGTTGTATAAGCAAATT
ATACAAATTAAGAACAAGAGTTAATTCTTACACTCCGAATACGCTCATTT
TCTCTTCTCTAATAACAATTAGTAAGATTCCCAGTAAACATGTTTAACCG
GCTCGGATTAAGCGTATTTCTTATAGCTGAAACTTCTTGAAATACAGCAT
CGTTTTGAAAACGTTACAATCTAAAGGAGGCCTACAATTTTTATAACAGA
TACTACATATGTACTGAATTGAGAAGATTTTTTTTTTTTTAAATGATAAT
ACTCTTGATAAACAGCCAATTAAGGTTATGTTCCTATCATCTGTTCTTTT
GGGGTCATGTAAAGGGTAAATTTGCATTTTTATTTTTTTTTCTTCTTCAT
CTAAGGTCAAATACTAGTATAAAAGTAGTTGTATGAAATATGTTGTTGCT
GGTCATTTTGAACCGGATACTTCATATGGGTTTCAGGTCCCAAAGATACT
TGTTTCTTTAATGTTCATTTTAGGCCTGCCAAATAATTTATTCTATTATT
TCACTGGCAATCAAGTTCAAAGCCTAAATCAAAGTTTGCATTGATGATGA
GCTTATATTTACTTTTCTTGTGACACTTTTGATTTTATATTTTGTCATAT
GGACCACCAAAAATGAACTCAAAAAGGATTAGTTTGTTTTACTATTTTGA
GTGAATTTATACAGTACTGATCAAAATGACCTACACATGAACAATGTAAT
TTTTTAAAGCATAATAAAAGGGTTTAATAAAATAATTAAGACAGTATAAT
TTTGAACTATTTTCCTTTTGATGATCGCAAACTAATGATATAATTTTCAG
AATGTAAGTCTCAGTTCGCTAACGGGCCGTCAGTATTCTGTTAAAAGACT
TAGCGAAAAGTTTGATGTCGTCAACATGCGAGATACTTTAGCCGCTGAGG
ATGTCTTCATAGAAAATGAGGCGTTTGTTGATATACAGGATGACGAACTC
TAGGCTTATTTTCTCTCAAGTATTATTCACGCCGTTACCTTTATTGTATC
ACGCAACCTTTTATCCGAAAAGAAACATTAAAAAATGGCCCAAATCAATT
GGTAATATTTAGTCAATTCTTCACTCACTATGGAATTATTATTATTCAAT
ATCGTTTGGGAATTGTTCACAGCTTTTTCACAGTAGCTAATTATAATTCA
ACGTTCAGAACACGGATTAGGAGAAAAGAAGCAAAAACATCGACAGCTGA
CAACAAAATACACCGTCTATTTGTATGTTAGTGAGGTAACGCCGTATAGT
TAATTTTTGATTGTTTTAACTTTTTTTAATTTGTTAAATTTTTAATAGTG
TCCAAACTTTGTTTTATATATTTTATTATTGTTTTAAATAATATACATTT
AATGGCATGAATAAATAATTGTTTATGTAGACAATCACATAATATTATAT
ACATATTTTATGTGCGACTTATTTGGAAATACCTAATATTATTATTATTT
GCATTTAACAAGTCCCCGAA back to top
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