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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1172 | supercontig | LSalAtl2s1172:34457..40632 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001046 >EMLSAP00000001046 ID=EMLSAP00000001046|Name=EMLSAP00000001046|organism=Lepeophtheirus salmonis|type=polypeptide|length=601bp
MKSLHSSIVHIPNEESYLIPSSSKSTFKAVCRAWNRLSRLQRSLVYIFII
VLLLFQVYLLNDVVGDGREEVSLFERQTYENSFSRESQQYRNKVEIVKEY
IQNIQDTTVKDEETKTTQGTGDNGDNISPQTSKGVLNFSGPTNSRQRSVV
DAFKHAWNGYRTYAWGHDHLKPISKKTMNWFGLGLSIIDGLDTMVVMNLV
DEFEVLHLTFKRPKNGLXTHLDFNISKDVNLFETTIRLLGGLLSAFHLTH
KKHDVLLEKATDLGNRLLGGFKTPSGIPYSDINLKTAKGHVPRWSPDSST
SEVTTLQLEFRDLSRCTSNPEYEDMAFQVSKKVHESTKWHGLVPIFINVE
TGDFQKSSTITLGARGDSYYEYLLKQWVQTGKTHEFLKEDYIEAIEGIKN
WLTKRTAINNYLFVGEVQWGGHNFKPKMDELVCFLPGTLALGVHHGMPES
HMEMAKELIETCYQTFATNPTHLAPEITYFNFKSGSKKDFYIKSNDAHYL
LRPETVESLWYMFYMTKDPIYQDWGWNIFQGIEKYTKYANGYSNIGNVRS
ALDTKPRDLMETYFLAETLKYFYLLFSDKNEIDLQKWVFNTEGHPLPVYE
S back to topmRNA from alignment at LSalAtl2s1172:34457..40632+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001046-696893 ID=EMLSAT00000001046-696893|Name=EMLSAT00000001046|organism=Lepeophtheirus salmonis|type=mRNA|length=6176bp|location=Sequence derived from alignment at LSalAtl2s1172:34457..40632+ (Lepeophtheirus salmonis)
ACCGCAACTGATAAAAAATTACACTTGGAACTGCAGGATTTGGAGATATT
TTGCCTCATTCATTGTCATGGTGCTTTGGTGAGACGGAGGCATGAAATCC
TTACATTCCTCAATTGTTCACATTCCAAATGAGGAATCCTATCTCATCCC
ATCCTCTTCTAAATCCACTTTTAAGGCTGTTTGTAGGGTAATAAATTAAA
AAAAAAAATTATTTCCCATAGTTCAAGTGATTCAGAGATTGTTCATCTTT
TCAGGCATGGAACAGACTCTCCAGACTTCAAAGATCCCTTGTATATATTT
TTATAATTGTGCTGCTTTTATTCCAAGTGTACTTGCTCAATGATGTTGTC
GGTGATGGTAGGGAGGAAGTTTCCCTTTTTGAGCGACAAACGTATGAGAA
TAGCTTTAGCAGAGAGTCCCAGCAATACCGTAATAAAGTTGAAATCGTCA
AAGAATATATTCAAAATATTCAGGACACAACTGTAAAAGATGAAGAGACA
AAGACGACTCAGGGTACTGGGGACAATGGCGATAATATTAGTCCTCAAAC
GTCAAAAGGGGTTCTAAATTTTAGTGGGCCTACAAACAGTCGTCAAAGAT
CCGTTGTAGATGCTTTTAAGCATGCATGGAACGGCTATAGGACTTATGCT
TGGGGCCATGATCATTTAAAACCTATATCCAAGAAAACCATGAATTGGTT
TGGCCTTGGACTCTCCATTATTGACGGTCTAGATACAATGGTTGTGATGA
ATTTAGTCGATGAGTTTGAAGGTTACATGCGATGCTTGCAATTACTCTTA
ATATTTTGTATCTAAATAAAATTTTTATATTTATTTGGCTGCGTCATTTC
CATTTAAGTCAATTTTCTATAAATAATAATAGTTTAGTGTTGCATTTAAC
CTTCAAGAGGCCAAAAAATGGATTGNATACCCACCTGGATTTCAACATAT
CCAAAGATGTAAACTTATTCGAGACTACAATCAGGCTCTTAGGAGGATTA
TTAAGTGCATTTCACTTAACTCATAAGAAACATGATGTACTTCTAGAGAA
AGCAACAGATTTAGGAAATCGTCTCTTGGGTGGATTTAAAACCCCATCCG
GCATACCTTATTCTGATATTAATTTGAAGACTGCCAAAGGACATGTACCC
CGGTGGAGTCCTGATAGTTCCACGTCAGAAGTCACAACACTACAGCTCGA
ATTCAGGGATCTTAGTCGATGCACTAGCAATCCTGAGTATGAGGATATGG
CCTTTCAAGTGTCAAAGAAAGTCCACGAGTCTACAAAATGGCATGGACTA
GTTCCGATTTTCATAAATGTTGAAACTGGTGACTTTCAAAAGAGCTCAAC
CATTACCTTGGGTGCTAGAGGAGATTCTTATTATGAATATCTCCTTAAAC
AGTGGGTTCAAACAGGAAAAACCCATGAATTTCTTAAAGAAGATTATATT
GAAGCAATAGAAGGAGTAATATAAGCAAATATTTCCACGAAGTTTCTCAT
TCTAAATTAAAAATTTATATTACAGATCAAGAATTGGCTGACTAAGCGTA
CTGCCATTAATAACTATTTATTTGTTGGTGAAGTTCAATGGGGCGGACAT
AATTTCAAGCCAAAAATGGACGAACTAGTAATGAATGACCCATCTAATTT
AATAACATTATTATGTTTTATTATCTTTGTTGTTGTGTAATTTAGGTTTG
CTTCCTACCTGGAACACTTGCTTTAGGAGTCCATCATGGAATGCCAGAAA
GTCACATGGAAATGGCAAAAGAACTAATAGAAACATGTTACCAGACCTTT
GCTACCAATCCCACACATTTAGCCCCTGAGATTACGTACTTCAATTTTAA
ATCCGGCTCTAAAAAGGATTTTTACATTAAGAGTAATGATGCACATTATC
TACTACGACCCGAAACTGTTGAATCCCTATGGTACATGTTTTACATGACC
AAAGATCCCATATACCAAGACTGGGGATGGAATATTTTTCAAGTAAGGCT
TTAATGATTAACTTACATTTATATATTACATTGTATTTATTTCGTTCTAA
TAGGGTATAGAGAAGTACACCAAATATGCTAATGGATATTCAAATATTGG
TAATGTGCGGAGTGCTCTTGATACAAAGCCACGGGACCTCATGGAAACAT
ATTTCCTCGCAGAAACACTTAAATATTTTTATCTCCTTTTCTCAGATAAA
AATGAAATTGATCTTCAGAAATGGGTCTTTAATACAGAGGGTCATCCATT
ACCAGTCTATGAGAGTTAAACTGCTCATTTTACAAGTTTAATAATGTTTG
TTGAAAAAAAGGGAAAAAGAAATTCGCCATAGCTATTCATCAACAATATA
CATACAACCCAAAATTTTATATATTATACTATAAACTTCATTCAGATTTT
TTTATTATCATACAAATATATATATATCTATAAATCAGTGAGTTAATTTT
TGAAGAAAAAAAAAAGTAGTAATAAAAACCTAATAAAAGTGTTATCAATA
ATAATAATTACTTTTGGGTTAATTTAATACACTCTGATGCCTCAGTTTCA
GTTTCTGAGTCTTTCCGCTCTCGTGAAATTTCTATTCCTTTCTTGCATGC
CTTCAAAGCATCAGTTTTTAAACCCTAAAAAATATTAATCAATCAGTAAG
TGAAATGTTATCTCATGATTACCTATATAAATTAAGCAACTTACGGTTTG
GATGTAGGACATACCAAGATTGACTAGATAGCGCTGAACATACTCGGAAT
CCTCATTTAAAGTTATGGCTTTCTTGAAGTACTCACTTGCCTCTGAATAG
TTACCTAAAAGAGAGTGAGTGGATCCAAGGGAATTCAGTATATTAAGAGA
TTGGGTGTGCTTCTCTCCTAAAAGGCTCACAGCCGCCTTGTAAGCACTTT
CAAAATGTTGAAGAGCGGATTTAGCTTGTCCTTTGCTAAGCAAATACTCT
CCATATTTATCTTGGCACATTCCCCAGAGGATCAAACTATCCTCGTCTAT
ATCTATTATATATACATGACGGAATTCAAATAACGAATCATACCTTTTTA
TACACACAAAATATAACAGACCCTGATTATCTTTAACTTTTTTTTTCATG
CTTCGCATACAAAAGGAAAAGCCTTCCTCAGCTTTTTTATCTTCTTTTTT
CACTGCATAAATTTGAGCCAATTTTAGAGAAATTTCCACAATAGAATTAT
CTTGCAAGGGCGTATTTTTCGGGGGTCCAAGGAGCCTTTGTATGACATCT
GAGAAAAGCTTTTCAGCTTTCAAATAATCACCTTTTTCAAATGCCATATT
AGCGAGAAGATCATTGATATAAACGACTCCATTTGTGTCACTTATATCAT
GCGCCATTTTAAGTGCCATATGAAGAATCATTTCTGCCTTTTCCAATTCA
TCCCTCTATAAATGCGTGGAGGATATTAAGAAAAAATATTAATTTCATAA
TTGATAATTCTATAATGTAGAACTTACTTGAATGTTAAGGATCCCTAATT
TAATTGTATCGACGAGTCTGTCCTGTGGAGAATCATTTTCTTTGACATTT
AATGCGGATTTGAGAGATGCAAAAATTCCAGAATATAACAAGACCTTAAA
ATTGTCTTTTTTTGACGAATGAGGTCGCATGAGTGAGGGATCAAATAATA
AGTTTTGTTTAGTTGAGCCAAAAGCAAAAATTTGTCGGAAGAATCGGAAC
GACATATTATTGTTTCTAAAAGAGAAAAAAGAAAAATAACGTAAATTTTC
TATTATAGCAACAACATCTAACAAATCTTTATGTTTTATAAAAGTATTTT
TTTCTTACTTTGAGTATTGTGTGTTCTCGACTTCACAGATATGCATTATA
ATAAATTTAAAAATGACATACTTTGTATAAACGTTAATCCTTAGACTCCG
CGAATATACGAACTACTACAACTTAGACAGGCGTTTAAATATAAAATTTT
CGCTTTCCAAATATGAAAAATTTACGAGAAATGTGAATCGAGAAAAGTTA
TTACATATTTTATGGAATAAATTGAAATGTTTTGTACAAATTTGAATTAA
TGTTACTCAAGAAAGGGAGAAAAGAACTGAAGGGGAAAGATGCAACTGGT
TTTAGACATATTATGTAAATATACATATGTATATTGAGAAATTAATTAAA
AGATTTTCCTATGATCTAGAACGTTTCCGACAACGATTTTTTTTCGAAGA
TGAAGATGATGATCTAAAAGGACTTGGAGAGGATGAAGACGTCGAAGACC
GACGACGACTTCTTTTCCGACGTTTTCTTTTTCGTTCTCGAGAGTACCTT
CGGCGGGAAATACTTTCTCGAGAGCGATCTCGAGATCTTGAACGTCTATC
TCTGGACTTGTATTTTCTACCACTACTACAACTTGAACTTTCAGTCCGAG
AAACAGGTTGCTCCTTTGAAATGGTGGAATGCTGCTTTTCACTTGAGTAT
CTATCCCTGGAGTTTGATCTCTTATCACGAGTACCTCTTTTTTCTTTGGA
ACGAGATCTTTTCTCATGGTTATATTTGTCTCTTGAGCGTGAGCGCTTCT
CATGGGATAATAATTGATCTCGTGAACGAGATTCTCTCTCATGAGAGGTT
CGATCAGATGAAATTGATCTTTTGTCCCGAGATTGTCTCTCTCTTGATCT
ACCTCTTGAGTTCTTTGTTAAACTGCTTCCACCCTTGGGTGAACTATTTC
CTTGATCTTCATCATCGTTGTTGTTCTTATATCGTTCACTGAATGAGTCT
TTCCTGTAAATGTGAGAGACATTTTCTCCTTCCTTTAGTTCCCCACTCTC
TATCCATCGCTTTTCACGAAGACTAAATCTCTCTTCCTTTGCCGCACACA
TTAAATTGATTTTTTCGGAAGTTTTTTCAAATTCCTTTTTCTTCTTACGT
ATTATGGACTCCAATTTTTCTTCGTCTGAAAAGGGGGATGAACATAATCT
TGAACTACTTTCATCCGATGAACTATCCGAATTTTTTTTCTCCTCATCAC
TCGCATAACCACTCAACAATTGTCCAAGAGCTTTCTGGTTATTATTACTC
TTGATGACTCCCGTTTCATGTTTCCGATGCTTATCCAAAATTTCAATACA
AACATTTTGTATTTCTGTAGACGTTACTTCTAATAAAATTTCTGTAAGAG
TGCGTCTCAATGTGATAGCCATCTCCTCAAGAAGCTCTTCCTTATTCTTC
AAAGTCTGGTGAAGAATACCATTACCATTAGGAGGAGAATTTTKGGAATC
ATTGCGAGATTCTGAACTCCTCACTTTTTCCTCATTTTCTTCTACATCAT
GACTCTGATCATCATTAGAGCAGTTATCCTCTTCTTTCTTAAAATCCCCT
TCATACTCCTTTTCCTCATTCATTTCCTGAAATTTCTCTTCTTCACGGAT
CCGTCGCATGATTTCTTCTCGCTCTTTTTGCCGCTTTTCTACTTGTTCCT
TTTTTTGTTTTTCCCTTTCCATTTTCTCTAACCCTTCCCTAATCCATGGA
GGGAGTTTCTTACGAGCTGTAGCATCAATTGTTGTCACCGTATTTGTTGT
ATTGACCTTGGATGGTTTTTGCGTCATGCTTAGAGAGGAAGATGAGGAGA
CTACGTCGGGGGGTTTGGACTTTTTGTGATGGCGATGATGTAGTTTAGGA
GAGTCTGAAATGAAGGAGGTTATGAATTAGAAAGCTGGAAGTGACTCCAG
ATCAAAGATATAGAACCTGGATGTTGTTTTTCTAGTTCCTCTTTAGCTCC
TCCGTGGGCTTCCTCATCATCGTCTTCATCATCTAGGTCCATGTTCGCTT
CTCCCAAATGATGAGAAGGAGGAGGAGGAGCTTGTTGATTATAGTTAGTA
AACTGAGTGAGTTGCGTAGGAACTGTGAATGCTCCTGAGGGTATAGGAGG
CGGTGGAGGAACAATGATCCGAGGACTGGCCCGAATAGGAGATCCCAACG
CCAAATCCTGATGTGTACCTTTCATGGCAATCCATTGTTGAGCCAAGGCA
GCCCAATCTACTACACTGTCTGTTGGAGCATAGGCACTTGGGTTCCAACA
GGAACCTTCGTTATTACCCCACATCCCAGGGTATCCGTCCGAATATGTCC
CGCTTTCTAAGAGATTATTCAGCCTCGTTTAGGGTTGTATTTAAACAATG
ACGTCACAAATACTCTTATTTCCCAA back to top
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