EMLSAT00000001918, EMLSAT00000001918-697765 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001918
Unique NameEMLSAT00000001918-697765
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s132supercontigLSalAtl2s132:611967..613904 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001918 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001918EMLSAG00000001918-684684Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000008445EMLSAE00000008445-717373Lepeophtheirus salmonisexon
EMLSAE00000008446EMLSAE00000008446-717374Lepeophtheirus salmonisexon
EMLSAE00000008447EMLSAE00000008447-717375Lepeophtheirus salmonisexon
EMLSAE00000008448EMLSAE00000008448-717376Lepeophtheirus salmonisexon
EMLSAE00000008449EMLSAE00000008449-717377Lepeophtheirus salmonisexon
EMLSAE00000008450EMLSAE00000008450-717378Lepeophtheirus salmonisexon
EMLSAE00000008451EMLSAE00000008451-717379Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778893auto778893Lepeophtheirus salmonispolypeptide
EMLSAP00000001918EMLSAP00000001918Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001918

>EMLSAP00000001918 ID=EMLSAP00000001918|Name=EMLSAP00000001918|organism=Lepeophtheirus salmonis|type=polypeptide|length=507bp
MRRRKMYAFMTIPLELETFMSYGILHCLDSFLFVFTFLPLRFISAVLSVF
GRILVSIIGIKRTPMVQICRPAEKIDILRGTIIVLCVYFMAFFDTSMMYH
IIKSQSVIKLYVFYNMLEVGDRLCSAFGQDTIDTLFWTATQPQKPRKHYI
SFIPLMFIALVYAFLHTLLILLQATTLNVAINAANKALLTIMMSNNFVEL
KSSVFKKFDKKNLFHVSCSDVRERFHLCALLFIVVVQTMKEYGWKEECFW
SLAPECLMIMFVEFMVDWIKHAFITKFNEVSTDVYRDYTTSLAYDLAQSK
QKSSSSDHSDWISRRMGFIPLPVGVVIIRVISTSVQIDTIQSVILLILAY
ISLLSCRILVFVLVMGKGCNLINEHKNKLYEEEFKNEEDKVCDILGPNSK
VLDVQKPQPQEIIGNDTFLEKEDLVMTIDSHVRVRKRTITSPQPYCDDRL
VNLNFGNTSVEGEKVEIMNSPRTLFVKNRSISTPDLIKRNVTEWPDSAVL
KTNISQM
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mRNA from alignment at LSalAtl2s132:611967..613904-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001918-697765 ID=EMLSAT00000001918-697765|Name=EMLSAT00000001918|organism=Lepeophtheirus salmonis|type=mRNA|length=1938bp|location=Sequence derived from alignment at LSalAtl2s132:611967..613904- (Lepeophtheirus salmonis)
TGTCTTTGTGGGGGCAAATTAGGAGTGAAATCACTCGTGAATACATACTG CAGAATGATGAAGGGCGCTATACGATGCGGCGTCGTAAAATGTACGCATT TATGACGATTCCGTTGGAATTGGAGACTTTTATGAGCTATGGAATCCTAC ATTGCCTGGATTCCTTTTTATTTGTTTTTACATTCCTACCTCTAAGATTT ATTTCTGCAGTATTGTCAGTATTTGGGCGGATACTTGTATCTATCATAGG GTTCGTACAATATTTTCTACATATAACTACATATTTTTCCAAAAAAAAAA AAAATGTTTTTAGAATAAAACGCACTCCAATGGTTCAAATATGTCGTCCA GCAGAGAAAATCGATATCCTCCGAGGAACTATCATTGTTTTATGTGTTTA TTTTATGGCCTTCTTCGATACATCTATGATGTATCATATTATAAAGAGTC AATCCGTAATCAAATTATATGTGTTTTACAACATGCTTGAGGTATTAGTT TCCTGGCTGTATGTATACCTATTTATATATTTATGAATTAGGTGGGAGAT CGCTTATGTTCAGCGTTTGGTCAAGACACCATTGATACCCTCTTTTGGAC TGCAACTCAACCACAAAAACCAAGGAAGCATTATATTAGCTTTATTCCGC TTATGTTTATTGCCTTAGTCTATGCTTTCCTTCATACTTTGTTGATACTT TTACAAGCAACTACGCTTAATGTTGCTATCAACGCTGCAAACAAAGCCTT ATTAACGATCATGATGTCCAATAATGTAGGACTAGATAATTAATCATAGG ATTAGTGTTGTAATGTATTTAATTCGTTTTTTAAAATACCATTTAGTTTG TAGAGCTTAAAAGTTCTGTTTTTAAGAAATTCGATAAAAAGAATCTTTTC CATGTCTCGTGCAGTGATGTGAGGGAAAGATTCCATCTCTGTGCTCTCCT ATTTATAGTCGTAGTTCAAACCATGAAGGAGTATGGATGGAAAGAAGGTA TGCTTATAATTTGAATATTACATATGCAATATCTACTTTTCAGAATGCTT TTGGTCCTTGGCCCCCGAGTGTTTAATGATCATGTTTGTTGAGTTTATGG TTGATTGGATCAAACATGCCTTTATTACCAAATTTAATGAGGTTTCCACG GATGTTTATCGGGACTATACTACATCCTTAGCTTATGATCTTGCTCAATC TAAACAAAAATCGGTACAACTTAAGGAGTTTGATATTTTATCATTTCATA TTTAATATATTTTCTTAGTCAAGTTCGGATCATAGCGATTGGATATCTCG AAGAATGGGGTTCATTCCTCTTCCTGTGGGTGTTGTTATTATTCGGGTGA TAAGTACTTCAGTTCAAATTGATACCATACAGTCCGTAATTCTTCTCATA TTGGCCTATATATCATTGCTGTCGTGTCGGTAAGACTTAATACACGGTGT ATCAAGTTCTTTTTATTCATGTATACAATTATTTCAGAATTCTAGTTTTT GTCCTTGTTATGGGTAAAGGTTGCAATCTAATAAACGAACATAAGAATAA GTTATATGAAGAAGAGTTCAAAAATGAAGAGGATAAGGTTTGTGATATTT TAGGACCTAATTCAAAAGTTCTGGATGTGCAAAAGCCTCAACCTCAAGAA ATAATAGGAAATGATACTTTCCTTGAGAAGGAGGATCTAGTAATGACCAT CGATTCTCATGTGAGGGTTCGAAAAAGAACAATTACAAGCCCCCAGCCTT ATTGTGATGATCGCCTTGTTAATTTAAATTTTGGAAACACGTCTGTCGAA GGAGAAAAAGTAGAAATAATGAATTCTCCTCGGACTCTTTTCGTTAAAAA TCGATCCATATCGACGCCAGATCTAATCAAACGAAATGTAACGGAGTGGC CTGATTCTGCTGTGCTTAAAACCAATATTTCTCAAATG
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