EMLSAT00000002441, EMLSAT00000002441-698288 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002441
Unique NameEMLSAT00000002441-698288
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1469supercontigLSalAtl2s1469:33430..34032 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002441 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002441EMLSAG00000002441-685207Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000010807EMLSAE00000010807-719735Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770027auto770027Lepeophtheirus salmonispolypeptide
EMLSAP00000002441EMLSAP00000002441Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002441

>EMLSAP00000002441 ID=EMLSAP00000002441|Name=EMLSAP00000002441|organism=Lepeophtheirus salmonis|type=polypeptide|length=200bp
MRTLVFVALIASTLANPKYPDTCGIENKPSVDSRIIGGQEAVRSQFPWLA
AVFTHGECTGSILDENWIITAKHCIDLNGVARVRVGAHSKYGSIIDEKNM
QIRESSHFNVSSKGDFALIKLNSSLILNRFVRPVCLPXRANVSSSFIGSK
ATITGWGVNSFDRANYAELYFAKNVSIIQCNQGKDIICTDANHGKGCLFW
back to top

mRNA from alignment at LSalAtl2s1469:33430..34032-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002441-698288 ID=EMLSAT00000002441-698288|Name=EMLSAT00000002441|organism=Lepeophtheirus salmonis|type=mRNA|length=603bp|location=Sequence derived from alignment at LSalAtl2s1469:33430..34032- (Lepeophtheirus salmonis)
ATGAGGACATTAGTATTCGTTGCTCTTATTGCGTCTACTTTGGCTAATCC
CAAATATCCAGATACTTGTGGCATTGAAAACAAACCTTCAGTGGATTCAA
GAATCATTGGAGGACAGGAAGCAGTAAGGAGTCAGTTTCCTTGGCTAGCT
GCTGTATTTACCCATGGTGAGTGTACTGGTTCTATTTTGGATGAAAATTG
GATTATTACTGCCAAGCATTGTATTGATCTTAATGGTGTTGCCAGAGTTC
GCGTTGGGGCTCATAGCAAATATGGAAGTATCATTGATGAAAAAAATATG
CAAATACGAGAAAGCTCCCATTTTAACGTATCGTCAAAGGGAGACTTTGC
TTTGATCAAATTGAACAGTTCTTTGATATTAAATAGATTTGTCCGCCCCG
TTTGCTTACCAARACGTGCAAATGTTAGTAGTTCCTTTATTGGTTCAAAA
GCGACCATAACAGGATGGGGTGTGAATAGTTTTGATAGAGCCAATTATGC
TGAATTATATTTTGCTAAAAATGTTTCAATTATTCAATGCAATCAAGGAA
AAGATATAATCTGTACCGATGCAAATCACGGNAAAGGCTGTTTGTTTTGG
TGA
back to top
Add to Basket