EMLSAT00000002732, EMLSAT00000002732-698579 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002732
Unique NameEMLSAT00000002732-698579
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s157supercontigLSalAtl2s157:24539..27948 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002732 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002732EMLSAG00000002732-685498Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000012132EMLSAE00000012132-721060Lepeophtheirus salmonisexon
EMLSAE00000012133EMLSAE00000012133-721061Lepeophtheirus salmonisexon
EMLSAE00000012134EMLSAE00000012134-721062Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769659auto769659Lepeophtheirus salmonispolypeptide
EMLSAP00000002732EMLSAP00000002732Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002732

>EMLSAP00000002732 ID=EMLSAP00000002732|Name=EMLSAP00000002732|organism=Lepeophtheirus salmonis|type=polypeptide|length=121bp
MDFELQYQRLDILDSQIILMIVDEMVYRGYGMTLEKYIRFLTRRLPDSTP
RSKRVLNDAVFNFLICMTGHRFLKFQDSEETFNLNVIKPWESFLNFVTGA
VGTLTDVLKGDPFKIPITDYF
back to top

mRNA from alignment at LSalAtl2s157:24539..27948-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002732-698579 ID=EMLSAT00000002732-698579|Name=EMLSAT00000002732|organism=Lepeophtheirus salmonis|type=mRNA|length=3410bp|location=Sequence derived from alignment at LSalAtl2s157:24539..27948- (Lepeophtheirus salmonis)
ATGGATTTTGAGTTACAATATCAAGTATTAAACATACTTGTATATGCATA
TGCCTATCATACCATATGTAGATAAAATTAGAGTAATTGTTATTACCTTT
TTTTTTAGATTGAACGTTGTATGAGACACATTGAGCTGATATAATTAGAT
AATATATTAGATTTAGTTAAAGAAATCCGATATTTTTAATGGTTTTTTTT
TTCTATCATTGTTTATTGTCTTATCAATCAAAACAGTGCTTACATCACGG
TCGGGCTCGACAATTTCAATTATTGTATGCACAACTTCAACAATTTACTT
TCCAAAGCCCAAAATTTATACATGATAGGCTGKTACAGCATCATAATTAT
AAACATTATTCACATTTTCAACCACCTGGGTAGTATTTTCGCCTTATTTT
TTAAAAAAACCTGTAAAACATGGCGTATTTTTTATTTTCTGCGGTCCATC
CTGGACGCGCGTATAAGAAATACTCAGTCAAATAATCAAAAAATTGTCAA
AAGAGTTATTTTAGTACAAAATTTTATCTTTCTAACTCACTCGAGATTAA
AACCAATTGCAATTATAAAACGAGAGACTCACATTACCAAAGGCATCTAT
TTTTTATTTTTTTTACGAGAGTTATTATATAAACAAAATACATAAAAATG
GTTCCTCTTTGTTTTTATTTTCCATAACCAAGGCTAGAAATATGTAAAGA
CATAAAGTTTCTTAACTTAAATTCCTGTCATTATTATGGTTTTATTTAAC
TCTTTCTTTTAAAAAATTATTACAAGAGTTTTTCACTTATATCTATGGTA
CATTTAAAAGAAGTGATAAGATATGGTAGGKTAATAAGTGGTCCATAGAG
AGAAAAAAACGTAAATAAACTCTAAACTCTAGATGAGGGATGTTGTTCTT
TTTTTTACTATCCATGTGAGTAGTGTTACATTAGTTGTTATTTAGGACTG
AAAACAGAATTCCTACCCAGTTCAGTCCTGCAAATTAGTCCTAAGACTTA
TAAAGTTCGGTATTTGATGACGTCACACAACTTTATTTATTTTTTCAATC
AGTTCTTACAGTCCGAAGGAGCGACAGTTATAAAGACCGTTTACAAAGGT
CCAAAGCCTGGACCGGACCGAATAAGTAAAGACTGACATAACACTATTAG
TAAGAGTAATTTTTTTTTTAAAGTTTAAGTTGGTATCCTGCAAAATAGGA
GTGTTTTTATTCATTATTAAAAGATTTCACGCTACTTACAAAATGAAAAA
GTATTAACCAGCAAGAAGCAATATGTTTGCTTTTTTTCGAGAATTGTATC
AAATATGMCCTACCAGTGTGTAAAATTTAAAATGTACAAAAATTAACGTC
GTAATCCTGACAATTTGAAGAATATTTGGGAGGAGAGCAACTAAGCTGTT
GTAACATTTTCATATGGGGTCAGCTGCAAGTAGTCATGATAGTAAGGAAA
TAAATTCCCACTCATTATATAACAACTTGTGCATGCAATGGTCACCATCA
ATTTTTTTTTTTTTTTGTAAGAGGTTTATTGAAATCTGGATCCCTCTGGC
AATCTTATCTCATCTTGTGATCCGCATACCTTGTTGTTGATTCATAATCA
CCTTCAGACTCATCTAGTTGCTTACTGACTCTACAGACAAAGGTTTGTCC
AGGTAAAAGAAGTTTGTAATGTCAGCATTGTTTAGTTCGGGGAGGATCAC
TATCCGGACAGTCTGCGTTTGCCACGATTGGGAATAAATATTTTGTTGAT
CAATGTCATTTTTTAACTGTCGTCAAAAATTTCTGGCTAGCTACCAAAAC
AGCAAATAACCTCCTATCTGCACACCTTTTGCAGGCAGTCAAATTTTGTT
TATCTACCCAAAGGAATAAAATGTGATTATTATCATTATAAAGATGGGCC
CTCTGGATTTTTTTTTTTTTTAAATAGAAAAAACAATAATTGCGCTATTA
TCATATTTTGTTTTAATTTTATTATTTCTATAAATTATATATACACTTAG
GTAAACCATTGTATGAACAAAGGCAGTGTACAAATGTGCATGTATAATTT
TCTTAATGGTAGTCAAAGAGAAATAAGGCTATAATTGGTTAATGTTATTT
TTGTTTTATATTCTAAGCAAACAAACAAATGTTATTTCTATTCTTCATCT
TCTTCTCTTAAGCAGTAAGTAGATATGCATTGTACTAACAACAAAGCATC
ATTTATTAAAAGCTGTTAGTAATGTGTTGATAGTAAATACCTAAGAAGAC
TCTAAGGAATGAGACAATTGAAATATTAATGAAATACATAACAAGTATCT
TAACTATCAACAAAAAAAATGCTAAAATTGAAACGTCTCGTTTTTTTTAT
CAACTATCGCCATGTGGCCAACGTTTTGTCCCTTTACCATTCTATTAAGA
GATTAGACATCCTGGATTCTCAAATAATTCTCATGATTGTGGATGAAATG
GTCTACAGGGGATATGGAATGACATTGGAGAAATATATTCGTTTTCTCAC
TAGAAGGCTACCAGACTCCACTCCAAGAAGTAAACGAGTCCTTAATGATG
CAGTTTTCAATTTTCTCATTTGTATGACGGGACACAGATTTCTTAAATTT
CAAGACTCTGAAGAGTTAAAAAACATTGAATTAGCAGATGGATTTGAGCA
AATTTTCTTCATGATTGATTCCATCCAAGCCCTCTCAATGTATTTAAAGT
TTTATTCAATAAATATACCAGTATTGGGCGTAACGCGTTACTATTATATA
TTATCATATAACGCGCTGCTAAATATATTACGATAATATTATTACAGTTA
CTGAGCCCGGTAACGCACGTTACAATCAGAGCTGTCTCACTGGCGCAACA
ACCGTAGATAAAGAGGAGGCGAAGACTGCTTTAAATCAACACAAGAAGAA
GACGATTTGGTTTGGGGATTTAAGATGGAAACAACGAAGGATAATTCAAC
CTTTTCTAAGGAGTTATACCTGCACCATTTTCAATTTATCAGAGAAATAG
ACAAGAACCTCACAGTAAAGTGCACTTTATGTGCCCGTAGGAAGCCTGTT
ATTAAGTAACTTATTACCTATTACTCAACAGAGAAGGTAATATTGTAAGG
AAATGTATTACCTTCAAATGCAAGTAACTAGTAATATGAAATATACTATA
TTTTGGAAGTAACATGCCCAACACCGGCAGTTCCTCCTTAGAAGGAGAAG
ACTCCCTTAGTCATCATGCATATCGGGCAAGTGGAGTCTATCTAATTTAA
CGCTAAATTTAGTATGTTTTAGACTATTTAGAGAACATTCAACCTGAATG
TAATAAAACCATGGGAGAGTTTCTTAAATTTTGTCACAGGAGCTGTTGGA
ACACTAACGGATGTCTTAAAAGGAGACCCTTTTAAAATTCCTATTACGGA
TTATTTTTGA
back to top
Add to Basket