EMLSAT00000003041, EMLSAT00000003041-698888 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003041
Unique NameEMLSAT00000003041-698888
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1729supercontigLSalAtl2s1729:42835..43410 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003041 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003041EMLSAG00000003041-685807Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013337EMLSAE00000013337-722265Lepeophtheirus salmonisexon
EMLSAE00000013338EMLSAE00000013338-722266Lepeophtheirus salmonisexon
EMLSAE00000013339EMLSAE00000013339-722267Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770391auto770391Lepeophtheirus salmonispolypeptide
EMLSAP00000003041EMLSAP00000003041Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003041

>EMLSAP00000003041 ID=EMLSAP00000003041|Name=EMLSAP00000003041|organism=Lepeophtheirus salmonis|type=polypeptide|length=116bp
MCDDCKPSTSMNKTTRTNLKNTVRDIVTYWVAAPSGNTKKDSEVSTESSS
DDDDQSTSVPQNKNQPIGPDASSASEIKEIRKKKILKIMYNSRKKHREQV
SQYSLSHLCFFNNYVV
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mRNA from alignment at LSalAtl2s1729:42835..43410+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003041-698888 ID=EMLSAT00000003041-698888|Name=EMLSAT00000003041|organism=Lepeophtheirus salmonis|type=mRNA|length=576bp|location=Sequence derived from alignment at LSalAtl2s1729:42835..43410+ (Lepeophtheirus salmonis)
ATCCGAAGAACCTAAAGAATTACAATGATGACGACATATCTTGTCAGTCT
TCTGACTCGGACTCAAAAGAAGTAAGTGGTCACTCATATTTTTACAAGTT
AAAAATAAAATCTTCAATATTTATAGCCTCCAAGTAAAAAAATGTGTGAT
GATTGCAAACCATCAACTTCGATGAATAAAACCACCCGCACCAATTTGAA
AAATACAGTGAGAGACATAGTTACTTATTGGGTAGCAGCTCCCTCTGGAA
ATACTAAAAAAGATTCCGAAGTATCAACTGAGTCATCATCCGATGACGAC
GATCAAAGGTATAATGAAATTAATCTATTTTCTTTTGTCAAAATATGTAG
ACTTAATGATCCGTGATTTAAAAAATGTGTTCTAGTACAAGTGTACCTCA
AAATAAAAATCAACCTATTGGACCTGATGCATCATCAGCTTCAGAAATCA
AGGAGATTCGAAAGAAAAAGATCTTGAAAATAATGTATAATTCAAGGAAG
AAGCACAGAGAACAGGTTAGTCAATATTCATTGAGCCATCTTTGCTTTTT
TAATAACTATGTAGTATAAATCATTT
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