EMLSAT00000003081, EMLSAT00000003081-698928 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003081
Unique NameEMLSAT00000003081-698928
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s173supercontigLSalAtl2s173:1481885..1482749 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003081 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003081EMLSAG00000003081-685847Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000013510EMLSAE00000013510-722438Lepeophtheirus salmonisexon
EMLSAE00000013511EMLSAE00000013511-722439Lepeophtheirus salmonisexon
EMLSAE00000013512EMLSAE00000013512-722440Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780783auto780783Lepeophtheirus salmonispolypeptide
EMLSAP00000003081EMLSAP00000003081Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003081

>EMLSAP00000003081 ID=EMLSAP00000003081|Name=EMLSAP00000003081|organism=Lepeophtheirus salmonis|type=polypeptide|length=249bp
MRRRTVGVGAIQRKKLDAERFKDKGSQLAENEFAEMNKQMETFRNKLEEF
AQKHTSDIKKDPAFRKHFQDMCASIGVDPLASGKGFWSEMLGVGDFYYEL
GVQIIEVCMASSHKTGGLIELEVLRKKVALSRGKKSQEISSDDILRAIKK
LKILGNGFTVIPLQSGRSLIQSVPGREMSMDQTAILQCAETNGAWISSSI
VEAELGWSSSRSQHVLDQLIKEGIGWIDEQNEXXPAYWIPSIFTSLSSL
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mRNA from alignment at LSalAtl2s173:1481885..1482749-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003081-698928 ID=EMLSAT00000003081-698928|Name=EMLSAT00000003081|organism=Lepeophtheirus salmonis|type=mRNA|length=865bp|location=Sequence derived from alignment at LSalAtl2s173:1481885..1482749- (Lepeophtheirus salmonis)
ATGAGGAGACGAACTGTTGGAGTCGGGGCCATCCAACGGAAAAAGTTGGA
TGCAGAGCGCTTCAAAGACAAAGGCTCTCAACTCGCAGAAAATGAATTCG
CAGAAATGAATAAACAAATGGAGACCTTTCGTAACAAGCTGGAGGAATTT
GCTCAGAAACATACATCAGATATCAAAAAGGATCCGGCTTTTAGAAAGCA
TTTTCAAGTACATTGTCATGCCGTATGCCTCTTTTGCAAAATTAAACTAT
TATTTATCTCTTTTAGGACATGTGTGCCTCCATTGGCGTGGATCCACTTG
CCTCAGGAAAGGGTTTTTGGTCCGAGATGTTGGGTGTCGGAGACTTTTAT
TACGAATTGGGTGTTCAAATCATCGAAGTATGCATGGCGTCCTCTCATAA
AACTGGAGGACTCATAGAGTTGGAAGTCCTACGGAAAAAGGTAGCTCTCT
CACGAGGGAAAAAGAGTCAGGAAATTTCTTCAGATGATATACTACGTGCC
ATTAAAAAGCTCAAAATATTGGGAAATGGGTTTACAGTGATTCCTTTGCA
ATCTGGCCGGTCCTTGATTCAATCCGTCCCTGGTAGTGTGTTCTTCATTT
ATTTTATGAATTATTATTAATATATGCTCAATCACTCATAGGAGAAATGT
CCATGGATCAAACTGCAATTTTGCAGTGTGCTGAAACAAATGGGGCGTGG
ATCTCTTCTTCTATCGTAGAAGCTGAGCTAGGATGGAGTTCATCTCGCTC
TCAACACGTATTAGATCAACTAATTAAGGAAGGGATTGGATGGATTGACG
AGCAAAACGAGAGMGASCCTGCCTATTGGATCCCTAGTATTTTTACTAGT
CTCTCTTCACTTTGA
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