EMLSAT00000004165, EMLSAT00000004165-700012 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004165
Unique NameEMLSAT00000004165-700012
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2206supercontigLSalAtl2s2206:1371..2666 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004165 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004165EMLSAG00000004165-686931Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000018025EMLSAE00000018025-726953Lepeophtheirus salmonisexon
EMLSAE00000018026EMLSAE00000018026-726954Lepeophtheirus salmonisexon
EMLSAE00000018027EMLSAE00000018027-726955Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768113auto768113Lepeophtheirus salmonispolypeptide
EMLSAP00000004165EMLSAP00000004165Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004165

>EMLSAP00000004165 ID=EMLSAP00000004165|Name=EMLSAP00000004165|organism=Lepeophtheirus salmonis|type=polypeptide|length=78bp
NLHPYHQISKYVKVHSSEEEWNLLAKSFTKNGIFLIVLVYNHGYTDFGRD
CMGGVLRNSAFRNAPLNRTSPSKIFTKY
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mRNA from alignment at LSalAtl2s2206:1371..2666+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004165-700012 ID=EMLSAT00000004165-700012|Name=EMLSAT00000004165|organism=Lepeophtheirus salmonis|type=mRNA|length=1296bp|location=Sequence derived from alignment at LSalAtl2s2206:1371..2666+ (Lepeophtheirus salmonis)
AATCTACACCCATACCACCAGATTGTAAGTTTTATTACTATATACTTTGT
GTGATTTTATTGGGAGGCTGAAAGTAACAAAAATTAACGTATATCTCCCG
TGAATACAAGGTATATTTCACATTAATGCAACGTAAATCTTACGTAAATT
AAAACGTAAATCCAACGTTTAAATATCTTTCCTAGATAGTGAATTATTAA
CCACGTATCAACGAAACTCAACGTAAATTAGACGTAAATACAACAAGGCA
CTTACTTAAATTCAACGTTAAAAAGTTAAGACATTACCTTGGTGACAGAT
AATGCCTCAAATATGGTTGCTGTTATAAGTCAGACTGTTATAAGTACTTC
CATATTGGATGCTTTGTGCATTCATTGAATATCTTCCCCAAAATGTAATC
AAACTGGGAGAAGTGGAGGCAAGGTTCGAAAAATTTCTGGTTTTTTTTTT
TGCCTTTGAGTTGTCAAGCCTTATACATATTCGAAGAAAACCAAAAACTG
TTCAACCTTCCCAACCAAAAATTAAAAACAAATGTTTCAACACGTTGGAA
GCAGTTAAAAGCTCAAAAAGAGAGCCAATAAGTGCCTGAGAAAGATTTCC
TGTTCACATTAAAATATCTTGCTAATCGTTCATCTCAGATTTTTATGAAT
AATAATAAACAAACTTATTTATTAAATATAATAATATTTATATATTCAAA
ATCCTAGATTGTATTATCATTTGATTTTTATTAGCTAAGAGTAAGATACA
TTAAAAATTAATTGACACGTGTAGAGCAATATGGGATGTTCTTCAGGTAT
TTTGTGAACAAATTAAACTTTTAATTTTTCACCGTTATTTATAGAGCAAA
TATGTCAAAGTTCACAGCAGTGAAGAAGAATGGAACTTATTAGCAAAGAG
TTTTACAAAAAATGGAATTTTCCTAATTGTGTTGGTAAGATATATCATTT
TTACTAAACATTAATTAAAGTAATAATCTTTCCATAACTAAATTCATTAA
CGTAGGTAGGATTGATGGAAACCACATTACAATTCAAGGTAAACGCAGAT
TGGGTTCAATTTGTTATAACTATAAAGGGAGTCATTTAATTGTTCTCATA
GATATTTGCATGTTTGCAATGCAAATTATGATTAATGAATATACATATAA
ATATTATTATATTTTAATCATAGGTTTATAATCATGGATATACGGATTTT
GGTCGTGATTGTATGGGAGGAGTTTTGAGGAACTCAGCATTTAGAAATGC
CCCGCTCAATAGAACTTCCCCTTCTAAGATTTTTACCAAATACTAA
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