EMLSAT00000004191, EMLSAT00000004191-700038 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000004191
Unique Name	EMLSAT00000004191-700038
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s221	supercontig	LSalAtl2s221:347464..350507 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000004191 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000004191	EMLSAG00000004191-686957	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000018147	EMLSAE00000018147-727075	Lepeophtheirus salmonis	exon
EMLSAE00000018148	EMLSAE00000018148-727076	Lepeophtheirus salmonis	exon
EMLSAE00000018149	EMLSAE00000018149-727077	Lepeophtheirus salmonis	exon
EMLSAE00000018150	EMLSAE00000018150-727078	Lepeophtheirus salmonis	exon
EMLSAE00000018151	EMLSAE00000018151-727079	Lepeophtheirus salmonis	exon
EMLSAE00000018152	EMLSAE00000018152-727080	Lepeophtheirus salmonis	exon
EMLSAE00000018153	EMLSAE00000018153-727081	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto776664	auto776664	Lepeophtheirus salmonis	polypeptide
EMLSAP00000004191	EMLSAP00000004191	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s221:347464..350507-

protein sequence of EMLSAP00000004191

>EMLSAP00000004191 ID=EMLSAP00000004191|Name=EMLSAP00000004191|organism=Lepeophtheirus salmonis|type=polypeptide|length=384bp
MTGYKTVLSLNKLKMRDVGVTEGLLKNLPPSKELLEFYKSKLSTSRERER
LLLDKWKESGFYYGSYKGVQAKLDSETSKRRDALSTVEDLKDALHQERTL
TRKLYAQNHGYAAXELEXRRKIQALVHIAGKSQGDIAKVLDTQELSLDMI
PIPSELQRYIDENPKPSPRIPTKDALVLELSVASKQLVDQEKLHLEQISN
LKNEIRSLKKKNDCIVKHYETRLEDCSRSLINLERVHKDLAKDFVQEKEK
FHQCESTWEKEKEKWIRKVQFLEQYGTNVPGMNVDAGAFYTSKRVVDRKM
SNNNKALHDVNRELKDMKVSCDSYRSKILTMESELDHLRDKNASQKEEAN
ELLLKLKSRIDVHKNRFEDLESRRKLEXEGYQSD

mRNA from alignment at LSalAtl2s221:347464..350507-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000004191-700038 ID=EMLSAT00000004191-700038|Name=EMLSAT00000004191|organism=Lepeophtheirus salmonis|type=mRNA|length=3044bp|location=Sequence derived from alignment at LSalAtl2s221:347464..350507- (Lepeophtheirus salmonis)
ATGACAGGTACATCCCATTTTCACACTGTAGTCTATAAATCATAAAGACT
AATCAAAAGCTTTCTCATCCTTTTCAAAGGCTTTAAAAATGCACCTCGAC
TCATTCAGTACGCTTACGTTCATATTATAAAATATAACTTATAAGACTCG
TTCCTTATATAATATATACAGAACTTATCTAATCAAATATTAATTACTAT
TTGATTTAAATAGGGTAAGTACAACATGGATGAAAATAATATGATAATAG
AGGAGGGAGCAGCTTTTTGAAGTTACTATTTAAATAGACATCTGTATTTT
TGGGAAGCTGTTCATTATTATTTTATTCTTAATTGAGGAAAAAACATGAT
ATAGTATAAAATAATCACTAGTGCGTAAAAGACGGTTTATAACACTCCAG
ATTTGCTGCAGAGTTTGTAACTGTAAAATGTTATGTCCTTCTYGGACTCG
GAATATAATMGAGGATCGKCATCGGAGTCCTCCCTGCCGATATCATTACT
GGGTATTGAGTGGGACATTGTGTCTTAATTACTTTAATCTCATGGAGTTA
ATTAATAAAAAATAATGATAGCTCAGCTGCTCTCATCTCCAAATATTCTT
TAAATTGTCAGGGTTTTTCAGTGTCGTTTATTTTTACATGCCGGCAAGAC
ATATTTTAAGTNCTAGGACTCGGAATATAATTGAGGATCGACATCGGAGT
CATTCCTGCCGATATCATTACTGGGTATTGAGTGGGACATTGTGTCTTAA
TTACTTTAATCTCATGGAGTTAATTAATAAAAAATAATGATAGCTCAGCT
GCTCTCATCTCCAAATATTCTTTAAATTGTCAGGGTTTTTCAGTGTCGTT
TATTTTTACATGCCGGCAAGACATATTTTAAGCATCACTACATATCCTCC
GAAGAAAATGGAAGCTGGATGGGTGGGGGAGAGTACGTAGATAATAGTTT
TGAATTGAGAAGGTAGATGTCGCTCATGGAATGTCAACAAACCCGCGATG
CTATATAAACAGAGAAACGTCAATAATAAATAAATAATTTATAAATTTCA
AATATAATATCTCTTATAATAAATAGGTTACAAGACAGTGTTGAGTTTGA
ATAAATTGAAAATGAGGGATGTGGGAGTAACAGAAGGACTCCTCAAGAAT
TTGCCTCCCTCCAAAGAGCTTCTCGAGTTTTACAAAAGTAAATTATCCAC
ATCTCGTGAAAGAGAACGTCTTCTCCTGGATAAGTGGAAGGAGTCGGGAT
TCTACTACGGATCCTATAAAGGAGTTCAGGCGAAATTAGATTCAGAAACG
TCTAAACGTAGGGATGCTTTATCCACCGTTGAGGATTTAAAAGATGCACT
CCATCAAGAGCGGACATTGACGCGAAAGTTATACGCACAAAATCATGGAT
ATGCCGTAAGTAATTGATTCATGTTTTATGCCTAATTTCTTACGCTAAAT
TACACGTTTTCTTTAGGCTCSCGAATTAGAAAAWCGTCGAAAGATTCAAG
CTTTAGTTCACATTGCGGGTAAAAGTCAGGGGGACATAGCCAAAGTTTTA
GATACACAAGAACTATCGTTAGATATGATTCCTATCCCTTCTGAACTTCA
AAGATATATTGATGAGGTATTAACTATATAGATATTATGGGAATACGAAC
AAATGAAATAGTATGAGTCTAGCTATTGAGTATTTTGCTAATCGACAAAA
TAAGAACTCAATGCAAATGGATGTGTCGGGGGCTATAGGCAGAAAGAGAA
GTAGGAAATTTATAATAATCCATTCATAAATACTTTTTATTCAATGCATC
ATATTCATTTATATTCCTGTAAAATTATTCGTTTTTATTTCGGGAATCTT
ATATCAATGTCTTATTGCACAGCTTAAGAGACCTTTGTAAATAAAATATG
TAAAAAAATCCATTACTGTTTGTATTTTTTCTACTTTACTTCATGTGGGA
TTTTTTTTTTACTTCATAAAGCCATAAAGCGTATAGCTGCATCCATTTGT
ATTAAAAGTTCATGTTTTGTCAATTGGCCGTTCCTGAGATGCCTTGATCC
GTGACATCTTGCTTTTTGTTTCTATGGTAATCTCTAATGAACATACAATA
TGGTACAAAATGAAATCGATATATTTATTTTTAGAACCCTAAACCCTCTC
CTCGAATTCCTACCAAAGATGCCTTAGTCTTAGAGTTATCTGTTGCTTCA
AAACAGTTAGTGGATCAAGAAAAATTACATTTAGAACAAATTTCAAATCT
GAAAAATGAAATAAGATCACTGAAGAAAAAGAATGATTGTATTGTTAAGC
ACTATGAAACAAGATTAGAGGACTGCTCAAGAAGGTAAATTCATATATAT
TTGAAACTATATTTATACCATAATTTTAAATTTAGTTTGATAAACTTAGA
AAGAGTGCACAAAGACTTGGCCAAAGACTTTGTGCAAGAAAAAGAAAAGT
TTCACCAATGTGAGTCGACTTGGGAGAAGGAAAAAGAGAAATGGATTCGC
AAGGTTCAATTTTTGGAACAATATGGAACTAATGTTCCTGGTATGAATGT
GGATGCCGGTGCTTTCTATACTTCCAAGCGTGTTGTAGACAGAAAAATGT
CCAATAATAACAAAGCTCTTCATGACGTAAATGTAAGTTCAATATGATCC
ATTTTATATGAATTTGTATATTTTTGAGTTCTTTTTATGTTTGAGTATAG
AGAGAATTAAAGGATATGAAGGTTTCATGTGATTCATATAGAAGTAAAAT
CCTTACTATGGAGTCTGAGTTGGACCATCTCAGAGATAAGAATGCTTCAC
AGAAAGAAGAAGCGAATGAGGTAAGATGATCACTACATAAGTATATTATG
GTGTTGTAGCTTATATGATTATGATGGAAATTAGTCTTTTCAGAAAATAT
CTCATTTACATAGTTTTTAAATGTGTTGGTTTGTTTTCTTGATAGTTGTT
GCTTAAATTAAAGTCACGAATTGACGTACATAAGAATCGCTTTGAAGATT
TGGAATCCAGAAGGAAATTGGAAAKGGAAGGCTACCAATCTGAT

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