EMLSAT00000004394, EMLSAT00000004394-700241 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004394
Unique NameEMLSAT00000004394-700241
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s230supercontigLSalAtl2s230:353480..354680 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004394 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004394EMLSAG00000004394-687160Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000019168EMLSAE00000019168-728096Lepeophtheirus salmonisexon
EMLSAE00000019169EMLSAE00000019169-728097Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776761auto776761Lepeophtheirus salmonispolypeptide
EMLSAP00000004394EMLSAP00000004394Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004394

>EMLSAP00000004394 ID=EMLSAP00000004394|Name=EMLSAP00000004394|organism=Lepeophtheirus salmonis|type=polypeptide|length=361bp
MSNAGLHGGNQQSLFPGLAAAAGFNNHSVPVPTXHWNPXAYVSPPAAMAL
KREDSHIKRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLGSEWKLLTE
TDKRPFIDEAKRIRAKHMKDHPEYKYRPRRKPKTLQKNGYXFPMPXLPSA
ASALDPFNPLHQTFVSNSSGGFDAPGAGXTGNXASNSTSSVSPTPSQPEK
PKLSYPISSAIGPPSLQMPPTTATSWPLFSADPSYEGIKSEIKSLSTTCS
AXQDWNRYHXDQAAAASLSGVPPPSMPTPSPEIDVKHTPDFHHHPSSLFY
NSFYHHKPPSSTDSSHFFGPYAXAAAAAAAXAANNSANNSAPGSNPYHHL
DPLRRPVGVII
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mRNA from alignment at LSalAtl2s230:353480..354680+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004394-700241 ID=EMLSAT00000004394-700241|Name=EMLSAT00000004394|organism=Lepeophtheirus salmonis|type=mRNA|length=1201bp|location=Sequence derived from alignment at LSalAtl2s230:353480..354680+ (Lepeophtheirus salmonis)
ATGTCAAATGCTGGACTCCACGGAGGGAATCAACAAAGTTTATTCCCAGG
ACTTGCAGCAGCGGCTGGRTTTAATAATCACAGTGTTCCTGTYCCAACAY
CCCATTGGAATCCTMAAGCCTATGTTTCACCTCCAGCAGCGATGGCTCTC
AAAAGAGAGGATAGTCATATCAAGCGGCCCATGAATGCCTTCATGGTCTG
GTCGCGTCTTCAGAGAAGGAAAATTGCTCAGGAAAATCCGAAAATGCACA
ATTCCGAAATATCCAAACGATTAGGTGTGTAAAAAATATTATTTTCCGTG
ATTACTTAAATATTAAAAAAAAAAAAAAACTTAAGTTAAAGATATTTTAA
TATTCAAGTTCTAATTCCAATATGTTATTTGCCTTTCAGGATCAGAGTGG
AAATTACTCACAGAGACTGATAAGCGACCCTTTATTGATGAAGCCAAACG
AATTCGCGCTAAACATATGAAGGACCATCCAGAATACAAATATCGCCCCA
GACGAAAACCAAAGACACTTCAGAAAAATGGCTACWCCTTCCCCATGCCC
YACCTTCCCTCMGCGGCCTCAGCCCTGGATCCCTTCAACCCACTTCACCA
AACATTTGTTTCAAATTCATCTGGAGGATTCGACGCTCCAGGAGCCGGAY
CCACTGGTAACMCCGCCTCCAATTCAACATCCTCCGTCTCACCAACACCC
TCACAACCCGAGAAACCAAAGTTATCATACCCCATCAGTTCCGCCATCGG
CCCTCCCTCTTTACAGATGCCACCAACAACGGCAACCAGTTGGCCTCTCT
TCTCTGCAGATCCATCTTATGAGGGCATCAAAAGCGAAATTAAATCACTG
TCCACCACATGTTCTGCGMCTCAAGATTGGAATCGTTATCATAKGGATCA
GGCCGCTGCCGCTTCTCTGAGTGGTGTTCCACCACCCTCTATGCCTACAC
CTTCACCCGAAATCGACGTCAAACATACCCCAGATTTCCATCATCATCCC
TCTAGTCTGTTCTACAATTCCTTTTACCATCACAAACCACCTAGCTCAAC
GGATTCGTCACATTTCTTCGGMCCTTATGCTSCAGCCGCTGCAGCAGCAG
CCGCCSCCGCCGCTAATAATTCAGCCAACAATTCCGCTCCGGGCTCGAAT
CCCTATCACCACTTGGATCCACTTAGGAGACCCGTTGGGGTTATTATTTA
A
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