EMLSAT00000004411, EMLSAT00000004411-700258 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004411
Unique NameEMLSAT00000004411-700258
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s231supercontigLSalAtl2s231:1189811..1192117 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004411 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004411EMLSAG00000004411-687177Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000019225EMLSAE00000019225-728153Lepeophtheirus salmonisexon
EMLSAE00000019226EMLSAE00000019226-728154Lepeophtheirus salmonisexon
EMLSAE00000019227EMLSAE00000019227-728155Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780510auto780510Lepeophtheirus salmonispolypeptide
EMLSAP00000004411EMLSAP00000004411Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004411

>EMLSAP00000004411 ID=EMLSAP00000004411|Name=EMLSAP00000004411|organism=Lepeophtheirus salmonis|type=polypeptide|length=540bp
MEELSDLLNLLGSAVGRALQGEENVEELDGKLVEAHSFLKRLSCVPDEGE
PDRSRSSELLSASSLQEDQADKLIELCKDTLSHEDVGESSKKLGAQLLVE
IARTNTGRRIMRTTGLVPTLSAVLESNCPLETAVQICRVLGNLSYESDEG
RHQILAHSDCLIHLHHLAKNSDKSQDPGQRLPVILPRFLLNFTSSNCPEF
AEKIAEIGFIDTIVQNVLSTTTNDAVFNSSLVFFVCICEGPTVIKIFHDQ
ADITPAITHILNHTTSPEVTEVALELIRFLVVDSDLSLKLAKSGLCTTIV
ERVLGRWRSQEFSVHRAKGCNMLINIMSHADSMKYLYALDNGHLKDKFLE
WLEDDGIEMKLKVTAALAIGNFACSEENSVTLVANGTSKLLIRLLCKHQN
PVKDLEIQHALLGSLRNLTVNPGSRTQLLNEGLLEPCIALTESLSPIPSY
SVISKLVPVIRLLVDGNLIINGIKSSLTESEHPVKVKKNALTLVSSLLKV
RPEQFKSMLKDLNFLEALEHESIKDLSEAIQLRDSIENDC
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mRNA from alignment at LSalAtl2s231:1189811..1192117+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004411-700258 ID=EMLSAT00000004411-700258|Name=EMLSAT00000004411|organism=Lepeophtheirus salmonis|type=mRNA|length=2307bp|location=Sequence derived from alignment at LSalAtl2s231:1189811..1192117+ (Lepeophtheirus salmonis)
CTCTTTCTCTTTTTCATTCATGAATTGGAGGACTCGACTGAACTTGAGAT
TGGATTACTTTAAGTTATTAATTAATCATTTTGGCTTTTGACCAAGCTCT
AATGGAGGAATTGTCGGATCTTTTAAATCTCCTTGGCTCTGCTGTAGGTC
GGGCACTTCAAGGAGAGGAGAATGTGGAGGAATTGGATGGGAAGCTCGTG
GAGGCGCACTCTTTTTTGAAACGCCTGAGTTGTGTGCCGGATGAAGGAGA
ACCTGACCGCTCTCGTAGTTCCGAACTCTTGTCCGCCTCCTCACTCCAAG
AGGACCAAGCAGATAAGCTCATTGAACTCTGTAAAGACACTCTCTCGCAT
GAGGATGTGGGGGAGTCCTCCAAGAAGTTGGGTGCTCAACTCCTGGTGGA
GATTGCAAGAACGAATACGGGACGTCGAATCATGCGGACAACAGGCCTGG
TTCCGACTCTCTCCGCTGTCCTGGAATCCAATTGTCCATTAGAAACTGCA
GTACAAATCTGTCGTGTTCTGGGTAATCTCTCCTATGAATCCGATGAGGG
ACGACACCAAATCCTCGCACATTCAGATTGTCTCATTCATCTTCACCACC
TAGCTAAAAATTCGGATAAGTCCCAAGACCCGGGGCAAAGACTCCCTGTC
ATCCTACCAAGATTTCTACTTAATTTTACGTCCTCAAACTGTCCTGAATT
TGCTGAAAAAATAGCAGAGATCGGCTTTATTGATACCATCGTACAAAATG
TATTATCCACCACAACCAACGACGCAGTATTTAATAGCTCATTAGTTTTT
TTTGTTTGTATTTGTGAAGGTCCAACAGTTATTAAGGTGATTATCATTTT
CGGATCTTTTTACATCATGAGTAAGGTTGTGCAAATTGTCGAAATCCTCG
TGAGCATATATAAAAAAAAATACCTTATTAATTACTTCTTCCTATTTTGA
AAATTCAAACGTATTAGTGAGGAATGAGCACCATAGTGAATTATGTCTGT
AGATTTTATGTCGTGTTACCAACATATTATAATTTTCACTCGTATTTAGA
CAATTTTCACATCCCTAATCATGAGTAATTTGTTTATATATATATGTATT
ATTTTTTTTTTTTAATGATTAGATATTCCATGATCAAGCGGATATTACTC
CTGCCATCACTCATATACTAAATCATACCACAAGTCCAGAAGTGACCGAA
GTTGCTCTCGAACTCATACGCTTCCTTGTTGTGGACTCGGATTTATCGTT
AAAACTAGCAAAGAGTGGCCTATGTACAACAATAGTTGAGCGAGTTCTTG
GACGCTGGAGGTCTCAAGAATTTTCAGTACATCGCGCTAAAGGATGTAAC
ATGTTGATCAATATTATGAGTCATGCTGATTCTATGAAGTACCTTTATGC
TCTTGACAATGGGCATTTGAAGGATAAATTTCTAGAATGGCTAGAGGATG
ATGGAATTGAAATGAAGCTAAAAGTGACTGCGGCTCTCGCTATAGGTAAC
TTTGCTTGTAGTGAGGAAAATTCTGTTACTCTTGTTGCAAATGGAACTTC
CAAACTTCTCATCCGTCTACTTTGTAAACATCAAAACCCTGTAAAAGATT
TAGAAATCCAGCATGCTCTCCTAGGTTCTCTGAGAAACTTGACTGTGAAT
CCTGGAAGTCGCACTCAACTCTTAAATGAGGGTCTCTTGGAACCCTGTAT
TGCCTTAACGGAAAGTTTGTCTCCCATTCCTTCCTATTCTGTTATATCCA
AACTCGTTCCTGTTATTAGATTATTAGTGGATGGAAGTAAAACGGCTTCT
CTWCGGATAGGGGRAGATAGGKCCCTTCTTWGCAAATATACYGAGTGGGG
CTCAGAAGACAATCAGTGGCTTAAATCCGCCTCTGGTCGTTTGCTTGCTA
CCCTTGTGAAGAATTCACAANCAGTGGAAGTAATGAAAAATGTGGTCGAG
GTAGGAGGCATGCCTCTTATCACCATGATGCTGATTTCTCACCACCAAAA
AATGCTTAACGAATCCCTCATCACACTTGTTCTTATGGCCAATGTTTTAC
CTAAGGATATTGTTGTTGCACAACTTTACACAGACTTAATTATTAACGGA
ATCAAGTCTTCTCTGACAGAGTCCGAGCATCCTGTAAAAGTGAAGAAAAA
TGCTCTGACCCTTGTGAGCAGTCTTCTCAAGGTTCGTCCTGAGCAATTTA
AATCCATGTTGAAAGATCTAAACTTCTTAGAAGCTCTTGAGCATGAATCC
ATCAAAGATCTAAGTGAAGCAATCCAATTGAGAGACTCCATTGAAAATGA
TTGTTAA
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