EMLSAT00000004736, EMLSAT00000004736-700583 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004736
Unique NameEMLSAT00000004736-700583
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s249supercontigLSalAtl2s249:426365..428755 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004736 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004736EMLSAG00000004736-687502Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020704EMLSAE00000020704-729632Lepeophtheirus salmonisexon
EMLSAE00000020705EMLSAE00000020705-729633Lepeophtheirus salmonisexon
EMLSAE00000020706EMLSAE00000020706-729634Lepeophtheirus salmonisexon
EMLSAE00000020707EMLSAE00000020707-729635Lepeophtheirus salmonisexon
EMLSAE00000020708EMLSAE00000020708-729636Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777563auto777563Lepeophtheirus salmonispolypeptide
EMLSAP00000004736EMLSAP00000004736Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004736

>EMLSAP00000004736 ID=EMLSAP00000004736|Name=EMLSAP00000004736|organism=Lepeophtheirus salmonis|type=polypeptide|length=594bp
MEDLLLLNSCGQDPSSFCVAQEKSRSEGEEEEGEEDLSQEAQKRDPSIVF
DIVXATQYGVFERVKDLIENEGVEANLRXSDNVTLLHWASINDRREIVNY
LLDRGAEIDAIGGDLRSTPLHWASRQGHLKIIVILVKRGARSDILDGEGA
MALHLAAQLGHMSIVAYLLSKGDSVDAKDSHGMTPLMWSVYRSYGVDPTR
LLLTLGSELSIRDDVHGNTPLHWAILAKNDMAXNLIISKTTDIHYILRLR
NKENETPSDMYRSSFKSSGKTEFLSSCVANKLIPLSHHSAAMSANSLYGY
FWLGRRVTIGHQNEDQLVTLWPISIYVGMKMWVHFTWFYYIFPFLNPMTS
VAFLFMSLFLCYNFYKSWKCDPGYIQSSASEKFDTIQFIAESSDSRGFDH
RVFCSTCLVRRPIRSKHCSICDRCVAKFDHHCHWVGNCIGLKNHKHFILY
LLTLTTMVVFTLYGVISFYFGSCGDTRDEGLSLVNFVKNFIRCNSWVFFL
SLNMIFHLFWVSILTLCQLYQIGLLSMTTNERVNAARYKHFGKEAAKGKF
ESPFNKGILRNFKDFFCQSPRSKDWFNIYSLDERNEDQRPLLSV
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mRNA from alignment at LSalAtl2s249:426365..428755-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004736-700583 ID=EMLSAT00000004736-700583|Name=EMLSAT00000004736|organism=Lepeophtheirus salmonis|type=mRNA|length=2391bp|location=Sequence derived from alignment at LSalAtl2s249:426365..428755- (Lepeophtheirus salmonis)
ATGGAGGATCTCCTTCTACTGAATTCGTGTGGTCAAGACCCTTCTTCCTT
CTGTGTTGCCCAAGAGAAGAGTAGGAGTGAGGGGGAAGAGGAAGAGGGAG
AGGAGGATTTGAGTCAAGAGGCTCAGAAGCGTGATCCTTCCATTGTCTTT
GACATTGTGMCAGCCACACAGTATGGTGTCTTTGAGCGTGTGAAGGTACA
TTTCCAAATGAGTATTTCGCAGTTTGGCCATTGAGTATTCCATTCCGTTA
GTGATTGGCATTTCTTTTCTTTTGTGTCTTAGGATTTAATTGAGAATGAG
GGAGTGGAGGCGAATCTGCGAGMCTCCGACAATGTGACCCTTCTTCACTG
GGCGTCCATTAATGATAGGCGGGAAATTGTGAATTACCTCCTTGATCGAG
GAGCAGAGATCGATGCAATTGGTGGAGACTTGCGATCCACTCCTCTTCAT
TGGGCTTCCCGTCAAGGACATCTCAAGATTATTGTCATTCTTGTTAAAAG
AGGTGCTAGGTCAGATATTTTAGATGGAGAAGGGGCCATGGCACTTCATT
TAGCTGCGCAATTGGGGCATATGTCCATTGTAGCTTATTTACTGTCCAAG
GGTGATTCTGTTGATGCCAAAGACTCTCATGGGATGACGCCTCTCATGTG
GAGTGTATATAGGTAAAGCTAATCCATTCAGATCCATCCACTATTTTATC
ATTCTTATATTTATTCAGATCTTATGGTGTGGACCCTACTCGTCTCCTAT
TGACTCTTGGAAGTGAGCTCTCTATCAGAGACGATGTGCACGGAAATACT
CCTCTTCATTGGGCTATATTGGCAAAGAATGATATGGCCGKCAATTTAAT
CATTTCTAAAACAACGGATATTCATTATATACTACGACTTCGTAATAAAG
AGAACGAAACTCCATCTGATATGTATCGTTCTTCATTTAAGTCAAGCGGA
AAAACTGAGTTCCTCTCGTCTTGTGTTGCAAACAAGTTAATTCCCTTATC
TCATCACTCTGCAGCAATGTCTGCTAATTGTAAGAAACTAGGAACAGTCT
ATGTTNGCGACTGGMCCATTCATCATTTATGGAATTATTGGATGGATATT
TCAGTCCTCCTTCGACTACATTATCKAATTAATGCTCTTTTTAGCCCTAT
ACGGATATTTTTGGCTGGGTAGACGAGTTACAATCGGACATCAAAATGAA
GATCAGTTAGTTACCCTTTGGCCGATCTCTATATATGTTGGAATGAAGAT
GTGGGTTCATTTCACATGGTTTTACTATATATTTCCCTTTTTAAATCCTA
TGACATCGGTTGCATTCTTATTCATGTCTTTATTTTTATGTTATAACTTC
TATAAATCGTGGAAATGTGATCCGGGCTACATACAAAGCTCTGCATCGGA
AAAATTTGATACTATACAGTTTATAGCTGAATCTTCAGATTCAAGAGGAT
TCGATCATCGCGTATTTTGTTCAACTTGTCTTGTTCGTCGTCCGATTAGG
TAACTAATTATTTTTTAAATTATTACAATCCTTTTCAAAAATTGAATAGA
TATAGCTAAATTTATAAAAAATAAAGACCTTCATATATCAGTTAATTACA
TTTGGTTTGTTTCTTTTTTTTTTTTTTGGTATGAATGAATCCATACAAAA
TACTTATTACTATTTTTAGCTAAAGAATAATTTTTATCGCATTATTCATT
TTAAAAATAAAGTGTGAAACGCCTTGTCATATGTTCGTAACATAATTATA
TAAATGTAGGCTTATTACATATATATAAATGCATGCTTTAAATTAATCTA
TTATGGAGATTAGAGATTTTAATTGAATGTATTTTATATTGTTTCAGATC
CAAACACTGTTCTATCTGTGATCGATGTGTCGCCAAATTCGATCACCATT
GCCATTGGGTAGGCAATTGTATTGGATTAAAGAATCATAAGCATTTCATT
CTATATTTATTAACTCTAACTACCATGGTGGTATTTACACTCTATGGCGT
GATCTCCTTTTACTTTGGTAGTTGTGGAGATACTCGGGATGAAGGTTTAA
GCCTTGTCAATTTTGTAAAGAACTTTATTAGATGCAACTCATGGGTATTT
TTCCTGTCACTCAACATGATTTTCCATCTTTTCTGGGTCAGTATTCTGAC
TTTGTGTCAGTTATATCAAATAGGACTCCTATCCATGACTACGAATGAGC
GTGTGAATGCAGCACGCTACAAACATTTTGGAAAAGAAGCAGCAAAGGGA
AAGTTTGAGTCTCCGTTCAACAAAGGAATTTTAAGGAACTTTAAGGATTT
CTTTTGTCAGAGTCCTCGTTCCAAGGATTGGTTTAATATCTACTCACTTG
ATGAGAGAAACGAGGATCAAAGACCTTTACTCTCTGTATAA
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