EMLSAT00000005170, EMLSAT00000005170-701017 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005170
Unique NameEMLSAT00000005170-701017
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s273supercontigLSalAtl2s273:20378..24248 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005170 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005170EMLSAG00000005170-687936Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000022600EMLSAE00000022600-731528Lepeophtheirus salmonisexon
EMLSAE00000022601EMLSAE00000022601-731529Lepeophtheirus salmonisexon
EMLSAE00000022602EMLSAE00000022602-731530Lepeophtheirus salmonisexon
EMLSAE00000022603EMLSAE00000022603-731531Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769463auto769463Lepeophtheirus salmonispolypeptide
EMLSAP00000005170EMLSAP00000005170Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005170

>EMLSAP00000005170 ID=EMLSAP00000005170|Name=EMLSAP00000005170|organism=Lepeophtheirus salmonis|type=polypeptide|length=351bp
MAFVGSGSPPRTPRVARPPSARNPSNGSHYIYDPNNGNTSIAFQNGSNAL
RPPSRAASVVTLSGNCSRNLTILQFIMNFILLTASLILIGTGAGLMGFYR
IHMLDMISVDFLIVPLVLVVGGVFTLLTSNFGFYVAVKGDPCLLITYSVF
LSIQFVILIMGIVSSVRLLFDIQAGLYNIDVIADLRHYETDSWVRYKWDT
LQSEYSCCGGYRWGHGYMDWKGTDMGARKNSVPDSCCLNISPQCGANVFD
ITDPRKVIGKIHIHGCLTIMFTRLETHVQLILIVFAVVGGILAIIELLGI
VMSCCMASSAAEQRSHWEGSTNNDFHDLPSTRPVXPSPMDVMMTSQHETA
F
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mRNA from alignment at LSalAtl2s273:20378..24248-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005170-701017 ID=EMLSAT00000005170-701017|Name=EMLSAT00000005170|organism=Lepeophtheirus salmonis|type=mRNA|length=3871bp|location=Sequence derived from alignment at LSalAtl2s273:20378..24248- (Lepeophtheirus salmonis)
ATGGCCTTTGTCGGATCCGGGAGTCCTCCTAGGTATGTCTGCTTTGTTTT TGATATGCATATTATGATTTAGGAAGATGAGAATTAAGGAATTAGGTAAA GTATGTGATTAAAGTCATTCCCACTTCCTCGACTTCTCACTTTTATAGTA TTGTTTTTTCTTTCATTGATTTCCTTTTTTTCCTTTTTTACTTTACAATC AATTAATGATTCCTTTTTCTTCTATTGTTTCTTCTTGTGAGAGTCGCACA GACTTACTAGTACTTATACAGAGTGCGACAACATAACTTCCTTTTTCCAA AAGCCCATAAAACATTTTTTATTATAAAAAAAAATTGGTTTATTATAACA ATAATACCCATCTAAAGATTTGGTTTTACACATTATTTTTATCTTTTAGT TTCTCATTAAATAACTTTTATATTCATGGGTTTTAGAGGAGGAATTGTTT TATAAAAAAAAGATGCAAAATTTAATTCACGACATATCTTATATCATAAC TGTGGATAAAAAAGCTTTCAAATGTATGTTTTTCAGATACCCAGGCAAAT TGCACTTACTATTTTATAAATTTTGCATTACATTGAATTTAAAAAAATAG ATTTTAGCTCTCTATCCTAATTATCCGTGGAGTTATTTGCATTCAAAGAA TTTTGCAAATTTAAAATTATAAAAATGGATAGAAAAATTGTTTTTTGTAC ATATTTTAGAAATTGGAGAAATTAATTTATTTTCATAAACACACAATTGT AKCTCCAGAGTTAAATTTCCGTGAGTTTCATTTTATAAAATTATCTGTKA AGCCATTTTTTGGGAACATTTAAAAAAAAAAATTTAACATGCAAACGCAT GTTCCTAACTATTCCAACGCATGATAGACACTGACTGTATTTCCAGTAAT TAAACTACGCCTATTCCGCTTAAACTTCTACAGGTTAATTGCCACCCATT ATAAAAAAAGGAAGTCTTACTATTTTTGGGTCGCATAATTAATTTTTGGT TAATAAAACATTCTCCATTCTAAGTTGAGATATGGACTAATGGTTATTTG TTTTCATTAGCTTGAGTTTATGACTCATCTAAGATGGTCGACATTGGGAA TAATGTTGTCACATGATTAAAAAATATTGTTCAGAAATCTGATGACATCA TTCATATATTTCATCAACAACGATAATGACTACAATAAATCAATAATCTC GATCAACTATATATTGAGTAAATTTAGCTCATAAGACTTGCAAACTAGGC TAAAATTAGGTTAAGAAAAAAAGTTATGAGCGTTTTTTGCTAGATGTATT TAGTGAGCTATATCTCAGGATTAATACATTACATCAAAAAAAGCTTAAAG TATGCTTAAAGGTTAAGTGTACGCTTAAAAAAGTTAATTTATAGTTTTGT GTTTGGTGAGCCAGTTGTGTGTTTCAGCGTTCCAAAATGGAAGTAAACAA AGATCAAATTCGATACATTTCTCCGTATTACTACGATCAAGGTGAAAAGG CGGAGGTCTTTAAAAAATATGCATCTCCAAGGATATTTGTCCCATTTTGT AATTTTTAAGTGATCCCAATTTGAAATATTAAAAATCTCTACTTCTCGTG AATGGATCGCTTTAAGGTTTCGATCCTGGTACCTTATTCCCAAGGAGGGA GTCCACTCTACCCCCTTCTGTAGTCTATTATTTTTCTTACGATGAATTCT CCTCTTGTCGTCCCTTGTGGAGTTGTGAATCTGAATTTGATCATCTCTTG AGATGGATGATCAAGTTAGAAGTTTCTTCCTTCAATTGCCTCGATTTTTC TTTTACGTCATGAAATTGGAAAAAATATGATGATGATGTTGACTATTTGC TAGTACACCCCATAAAAAATAGGATCCCAACACAATGAAACAACAATTCT TGGAGATGCATGTTTCTGAATAGATCTTTTTTTTAAATATAAATTGAATA TTTTTCTAAAATATAAGCTATGATATTTCTCATCACTATGTATTTTGAGT AAGTTTTTAGGGGTATAAAGAAGAGTTTCGTTTTTCATCATTTTTCAGGG TAAAAATGAAAATATATCGAGTTCAGAAGAAGATACAGAATGAATAAAAA TATCATAAAAAACCACTTTTACATAAGTTTTGTTAGTCTTACTTTTAATT TAGGGACTGTTGTAAGGCTAAAAATTATTTTGAACAATGATATTCCGAAT TACCATAATTCCAGATATTTCAGAATTTAGATGACTGAGATAAAAACAGA GATCAGCTTTGGATTCTGCCCTTAAAACTCATTTCTACAAAATATAATCT ACATTTGTATGTGAGAGAGAAAATATCGATATATGAAAATTGGGGAAAAT ATCTGATATTTTGCACGTTTGTATATTTGCATTGATTTATATTAATTACT TAATGCAAAGAGATTTTGAGCTTGTTTACTCTCTAACATTTTCCTCACTT TTCCAATCAGTCCTTTCCTTAATATACCAAAGAGCTGCTCTTATCTAATT GATTTATTGACAAATCAAATACAATCTCTTCAATGGGATTTWTTTCKCCA ATTCTATTCTCTCTGTCCTACATATTTACTCCCCCCCCCCCCCCAATGTT ATTAATAAAGATTATACAAGCTTCTTCTGACTCGATATTTTTTTATTTAT TTTTGCACTGAAAACTTTTTATCTTTTGTGTCCACATTAATAGATAATAT AATTGTKCCTCCGATTTTCCTTTCAGAACACCTCGAGTTGCGAGGCCCCC GTCTGCCCGTAATCCTTCCAATGGATCTCATTATATCTATGATCCAAATA ATGGTAACACCTCTATTGCCTTTCAAAATGGAAGTAATGCTTTGAGACCC CCTTCACGCGCAGCCTCTGTTGTGACGCTGAGTGGAAACTGTTCACGCAA TCTCACGATCCTGCAGTTCATTATGAATTTCATTCTTCTCACTGCGAGTC TCATACTCATTGGAACTGGAGCGGGTCTCATGGGKTTTTACAGGTATGAA GGCTCTTTAAACCCAAAATACATATTATACGTTATTATTTAAAAAAAAAT TGCAATAGGATTCACATGCTGGACATGATTTCTGTAGACTTTCTTATCGT TCCTCTGGTCCTGGTTGTTGGAGGGGTTTTCACGCTCCTAACATCCAATT TTGGATTTTATGTGGCCGTCAAAGGTGATCCTTGCCTTCTCATAACGTAT TCCGTGTTCCTATCAATTCAATTTGTTATTCTCATAATGGGAATCGTTTC ATCAGTGCGCCTACTCTTTGACATCCAAGCGGGCCTTTACAACATTGACG TCATTGCGGATCTACGACATTATGAAACAGATTCTTGGGTTCGATACAAA TGGGACACACTTCAGAGTAAGTATATTTTTTGTTACCGCTCTACTTTTAA AATGGATACAAGCTTTTTATAGGTGAATACTCATGCTGTGGAGGCTATCG TTGGGGACACGGCTACATGGATTGGAAGGGYACAGACATGGGYGCACGCA AAAACTCTGTGCCTGATTCTTGCTGCTTAAATATCTCTCCCCAATGTGGA GCCAATGTTTTTGACATTACGGATCCACGGAAAGTAATTGGCAAAATCCA TATCCACGGATGTCTTACAATCATGTTTACTCGACTAGAGACGCATGTTC AACTGATTTTGATTGTATTTGCAGTTGTGGGTGGAATATTAGCAATCATA GAGCTTCTAGGGATCGTCATGTCATGCTGTATGGCCTCTTCAGCTGCAGA GCAGAGATCCCATTGGGAAGGATCCACCAATAATGACTTTCATGATTTGC CTTCTACGCGTCCTGTTKCTCCTTCGCCAATGGATGTTATGATGACAAGT CAACATGAAACTGCCTTTTGA
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