EMLSAT00000006169, EMLSAT00000006169-702016 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006169
Unique NameEMLSAT00000006169-702016
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s336supercontigLSalAtl2s336:642811..644202 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006169 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006169EMLSAG00000006169-688935Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000026942EMLSAE00000026942-735870Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779080auto779080Lepeophtheirus salmonispolypeptide
EMLSAP00000006169EMLSAP00000006169Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006169

>EMLSAP00000006169 ID=EMLSAP00000006169|Name=EMLSAP00000006169|organism=Lepeophtheirus salmonis|type=polypeptide|length=463bp
MRIINXPXAAAIAYGLDKKEGEKNVLVFDLGGGTFDVSLLTIDNGVFEVV
STNGDTHLGGEDFDQRVMEYFIKLYKKKKGKDLRKDNRAVQKLRREVEKA
KRALSSAHQVKIEVESIFEGDDFSETLTRAKFEELNMDLFRSTLKPVQKV
LDDADMQKKDIDEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINPDEAVA
YGAAVQAGVLSGEQDTGDIVLLDVNPLTMGIETVGGVMTKLIGRNTVVPT
KKSQIFSTAADNQNTVTIQVFEGERPMTKDNHLLGKFDLNGIPPAPRGTP
QIEVTFEIDANGILQVSAEDKGTGNKEKITITNDQNRLTPEDIEQMIHDA
EKFADEDKKLKERVESRNELESYAYSLKNQLNDKEKLGAKITDEEKEKME
EAVNEKISWLEEHQDADSEDFKAQKKELEDTVQPIIAKLYQGGAPPPGGE
APGGEDDMDKDEL
back to top

mRNA from alignment at LSalAtl2s336:642811..644202-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006169-702016 ID=EMLSAT00000006169-702016|Name=EMLSAT00000006169|organism=Lepeophtheirus salmonis|type=mRNA|length=1392bp|location=Sequence derived from alignment at LSalAtl2s336:642811..644202- (Lepeophtheirus salmonis)
ATGCGCATTATCAACGAMCCCMCCGCAGCAGCCATTGCTTACGGTCTTGA
CAAGAAGGAGGGCGAAAAGAATGTCCTGGTTTTCGATCTGGGAGGCGGTA
CCTTTGACGTCTCTCTTCTTACTATTGATAATGGTGTATTTGAAGTCGTT
TCTACCAATGGAGACACTCACTTGGGTGGAGAAGATTTCGATCAAAGAGT
AATGGAGTACTTTATCAAGCTCTACAAAAAGAAGAAAGGAAAGGATCTCA
GAAAAGATAACCGTGCCGTTCAAAAGTTGAGACGTGAAGTTGAGAAGGCT
AAGCGAGCACTTTCCTCTGCTCATCAAGTTAAGATTGAAGTTGAGTCCAT
CTTTGAAGGTGATGACTTTTCTGAAACATTGACTCGTGCCAAATTTGAAG
AACTTAACATGGATCTCTTCCGTTCTACACTCAAACCCGTACAAAAAGTT
TTGGATGATGCTGATATGCAAAAGAAGGATATTGATGAGATCGTACTTGT
GGGGGGGTCCACTCGTATTCCTAAGGTTCAACAATTGGTCAAAGAATTCT
TTAACGGAAAGGAACCCTCAAGAGGAATCAATCCTGATGAGGCTGTTGCC
TATGGTGCTGCTGTTCAGGCTGGKGTCCTTTCTGGGGAACAAGATACCGG
AGACATTGTATTGCTTGATGTTAATCCTTTGACAATGGGTATTGAAACTG
TGGGAGGAGTCATGACTAAGCTCATTGGCCGTAACACTGTTGTTCCTACC
AAAAAATCGCAAATTTTCTCAACTGCCGCTGATAACCAAAATACAGTAAC
CATCCAAGTTTTCGAGGGTGAGCGTCCTATGACTAAAGATAACCATCTCT
TGGGAAAATTCGATTTGAATGGCATTCCACCAGCCCCTAGAGGAACACCT
CAGATTGAGGTTACCTTTGAAATTGATGCAAATGGTATTTTGCAAGTATC
TGCTGAAGATAAGGGAACTGGAAACAAGGAAAAGATAACAATCACTAATG
ACCAAAACAGGCTTACACCAGAAGATATTGAGCAAATGATCCATGACGCT
GAAAAGTTTGCAGATGAGGATAAGAAACTTAAAGAACGTGTTGAATCTCG
TAACGAATTGGAATCGTACGCTTACTCTCTGAAGAACCAACTCAATGATA
AAGAAAAGTTGGGGGCTAAGATTACCGATGAAGAGAAAGAAAAGATGGAA
GAAGCAGTTAACGAAAAGATCTCTTGGCTTGAAGAACACCAAGATGCTGA
TTCAGAGGACTTCAAAGCTCAAAAGAAAGAATTGGAAGATACCGTTCAAC
CCATCATTGCTAAACTTTACCAAGGAGGAGCTCCCCCACCAGGTGGCGAG
GCTCCTGGAGGCGAGGATGATATGGATAAGGACGAACTATAG
back to top
Add to Basket