EMLSAT00000006575, EMLSAT00000006575-702422 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006575
Unique NameEMLSAT00000006575-702422
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s35supercontigLSalAtl2s35:814397..816004 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006575 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006575EMLSAG00000006575-689341Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028770EMLSAE00000028770-737698Lepeophtheirus salmonisexon
EMLSAE00000028771EMLSAE00000028771-737699Lepeophtheirus salmonisexon
EMLSAE00000028772EMLSAE00000028772-737700Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779811auto779811Lepeophtheirus salmonispolypeptide
EMLSAP00000006575EMLSAP00000006575Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006575

>EMLSAP00000006575 ID=EMLSAP00000006575|Name=EMLSAP00000006575|organism=Lepeophtheirus salmonis|type=polypeptide|length=156bp
MTFPKNPELHNRWLINWRRENWNPSKWSRICSKNFKKDLIIRHKVKCSLV
DGAVPTIFDFPKHLIIVESNRRVLERSNPEEKREFYYQKGYAYVRKTFNM
ALPHPSVIRSWYGTIDGNPGFTVKASKALKLRVEQQRVAEGKVYCNLTLD
EMSIRK
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mRNA from alignment at LSalAtl2s35:814397..816004+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006575-702422 ID=EMLSAT00000006575-702422|Name=EMLSAT00000006575|organism=Lepeophtheirus salmonis|type=mRNA|length=1608bp|location=Sequence derived from alignment at LSalAtl2s35:814397..816004+ (Lepeophtheirus salmonis)
ATGACGTTTTTAATATTATAAGGCTATAATATTCATCGTAGTTGTAATTT
TCTCTCAAAATCACGTGGTATTTTAAACAAATCTTCCACTTTAAGATAAT
GTTGGAAATCCCAAAACCATAGAGATGTTAAAATAATAGAATACTGATTT
GGAGAAAAAAGTGAGATTGTTCAGCTGTCGAGGAAAAAAAATATTGCGCC
CAAAACAAACAAGTCGTTAGTACTTCTCCAATACTATTACTTATTAGTAA
TAGGAACTTTGTTATTTAAAATTCATTTATCATCCCTTCTGGATTGTAAT
ACTCGCTGTTGGTAAGTTATTAAAATATTTATTCCTTTAACTATATGTTA
AACTTATTATTTTGACAATTTGTAGGTTTACAATGCCTACTTGCGTGGCT
TATAATTGCACCTCCAGGACGCAACCTTCTATCAGTCCTTCAGGACTAAG
AACCATGAGGGTCAGGATTATTCTCAGCATGTTGAGAATGATACTAATAC
TTATGACCATGGACTAGAGGAGAAATATGGAAGGCCCAATCACGAATTTA
TTAGTTTTTCACGTAAGTAAAATTAATATATTTAAATAACAATTTAATCA
AATTAAAGACAGTTTTAATTATTTTTTCCCCCGAATTCCTGCCCTTTTAC
TACCTCCTCTCTAAACTACATATTGGACCACTTTATTGGTTTAAACATAT
TTTCTTTTAGATTTCCAAAAAATCCAGAGCTTCATAATCGCTGGTTGATT
AACTGGCGGAGAGAAAATTGGAATCCCTCTAAGTGGTCGAGAATTTGTTC
AAAAAATTTCAAGAAGGATTTAATCATTCGACATAAAGTCAAGTGTAGTC
TTGTTGATGGAGCAGTACCAACTATTTTTGATTTTCCCAAGCACTTAATT
ATAGTTGAGTCAAATCGAAGAGTATTAGAACGATCTAATCCTGAAGAAAA
AAGGGAAGTAATTCTTGAATAAGATATAGACGATGACAATAATCACGAAT
TCGAATGTACTTTCGGATCATTCGTACTCTTTGCCAAATTCAATGGATCT
CCTGGGCGTAGAGAACTAAAAAGCCAAACTTCAAATTATAACCCTTGCAG
AAGAAAATGAGCAGCTCTGAGAAAATTTAAAGACCTTAAAAAAAGAAAAA
AAGAGATTCAAACAGAACCCCTTAAGATTTCAAAAGCGGCTCAAGACAAC
CAGAGATCTATTTGACCATTTAAACAGAAAAAAAAACTTATTTCTGGGTC
AAGCGAAGAAGTACTATCTTCCATAACATCTGGAATCCCCAAAATTTTCT
TTCAACGTATTATTCTCAATAACAAAAAGGGGATAATCTCAAGACAAAAA
TATCCTGATGAATTTAGAAAATTTACTCTAACCTTGCAGTTTTACTATCA
AAAGGGGTATGCCTATGTTCGCAAGACATTTAACATGGCTTTGCCACACC
CTTCAGTTATTAGAAGCTGGTACGGAACAATCGATGGAAACCCAGGATTT
ACGGTGAAAGCATCTAAAGCCTTGAAACTTCGAGTAGAACAGCAAAGAGT
TGCGGAAGGAAAGGTTTATTGCAACCTAACGCTCGACGAAATGAGCATTC
GAAAATGA
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