EMLSAT00000007126, EMLSAT00000007126-702973 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007126
Unique NameEMLSAT00000007126-702973
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s4024supercontigLSalAtl2s4024:4806..7972 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007126 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007126EMLSAG00000007126-689892Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000031309EMLSAE00000031309-740237Lepeophtheirus salmonisexon
EMLSAE00000031310EMLSAE00000031310-740238Lepeophtheirus salmonisexon
EMLSAE00000031311EMLSAE00000031311-740239Lepeophtheirus salmonisexon
EMLSAE00000031312EMLSAE00000031312-740240Lepeophtheirus salmonisexon
EMLSAE00000031313EMLSAE00000031313-740241Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768528auto768528Lepeophtheirus salmonispolypeptide
EMLSAP00000007126EMLSAP00000007126Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007126

>EMLSAP00000007126 ID=EMLSAP00000007126|Name=EMLSAP00000007126|organism=Lepeophtheirus salmonis|type=polypeptide|length=363bp
MAFYQNFPCQPVAFTMGDFSTRVEDREALDKRKRNERIRRPMNAFMVWAK
VERKRLAXENPDLHNADLSRMLGTKWKSLTPAERAPSVQEAERLRLKHMQ
DFPHYKYRPRRKKKERSKGDKPSEGNNSASSSYSPNFHGHEGSSTDKSCL
SVDTPEPSPNEGSSDYFSTSHQITFMPTPETSPQLSSSSMTYNNSTNMCG
MEEVAYQYPNYGDAYFWKNYDHLGFNYAXGGYRAPPPHHVPSGVAATSKW
ASDPHIQTCGVDYSGSNGSNSSSTSSGGHNADMNLNRYGKLYAQQSPSLQ
DSTTAAALYNPHQNQWLGAGGSSSGGENISSFGFAIAGVREPHSHLHSYH
PSTHHPHPPHHES
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mRNA from alignment at LSalAtl2s4024:4806..7972+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007126-702973 ID=EMLSAT00000007126-702973|Name=EMLSAT00000007126|organism=Lepeophtheirus salmonis|type=mRNA|length=3167bp|location=Sequence derived from alignment at LSalAtl2s4024:4806..7972+ (Lepeophtheirus salmonis)
GGACTACTCTGGAGTAGGTTCATAGATCCGCTAGTAACAAAGTCCTGCTG
AGGCTACATATTAGGTACAACAAAAAAAAGTGATATATTTCGTAAAAAGA
ACACACTACGTTTTTAATAGAGAAAAAGAGWGAAAAAATGAATCGAGGTC
CTTTGGCCTATAAAGGATTTCATAGGTAGGTTCCTCAATCGCATTTCATT
TATTTTAATTATGTCTTGGAGTGGATTTTAAAGCATTCCGAATTATGGCT
AAAAGAATACTAGAATAATTAATATGTACTGGTTTTATATTTAGAAAAGG
GGTTGAGCACTTTCCAAGATGGCATTCTACCAGAATTTCCCATGTCAGCC
AGTGGCATTTACAATGGGGGATTTCAGCACAAGAGTAGAAGATAGGGAAG
CTTTGGATAAAAGAAAAAGAAATGAAAGGATAAGGAGACCCATGAACGCC
TTCATGGTATGGGCCAAAGTAGAAAGAAAAAGACTGGCAGRTGAAAATCC
GGATTTGCACAATGCGGATTTATCTCGCATGCTCGGTATGAACTAAGATG
GCTCAAATTATTATGAATATTTCTAATTTTACTCACTCACAAAGGTACAA
AATGGAAGTCATTAACTCCTGCAGAGCGTGCACCGAGTGTTCAAGAAGCA
GAGCGATTACGATTAAAACACATGCAAGACTTCCCCCATTATAAATATCG
TCCAAGACGGAAAAAAAAGGAACGATCTAAGGGGGATAAGCCAAGCGAAG
GTAACAATAGTGCCTCCTCTTCATACTCTCCAAATTTCCATGGCCACGAG
GGAAGTTCAACTGATAAATCCTGTCTCTCAGTTGATACTCCAGAGCCTTC
TCCAAATGAAGGTTCCTCAGATTATTTCAGTACGTCTCACCAAATAACAT
TTATGCCAACTCCAGAAACCTCTCCTCAGCTCTCTAGCTCTTCAATGACT
TATAACAATAGTACTAGTAATAACAACAATAATAACTCACGGGGAAATCC
GGATCATTCTTCATCATTTAATGTATCTCAACAAAGCTCATCTGCATCAG
GTAACAAAGGCTCTTTATTTTATATACATAGATATTAGACTTTTATGATT
ATGGGTTAATTTGTGTTTCCCCTCCGCAAAGATCTTTTTTTCCTGAGGAT
AATCGATAAACTGTTTTTGGCTATTTTAGAGTCCTTTCAAGCTATTTTTA
GCGCTGTCAATGCCATTTGAATTTGTAAAAAAAAATTGGTAATTGGATTG
ATATTAATGTAGAGTTGTATTGTACATTTATAGATATGTGTGGCATGGAG
GAGGTAGCCTATCAGTATCCTAACTACGGGGATGCTTACTTCTGGAAAAA
CTATGATCACTTGGGATTCAACTATGCTRCAGGAGGCTATAGAGCMCCAC
CCCCGCATCATGTTCCATCTGGGGTTGCTGCAACAAGTAAGTGGGCTTCC
GATCCTCATATTCAAACGTGTGGTGTGGATTACAGTGGGAGTAACGGAAG
TAACAGTAGCTCCACCAGTAGTGGCGGCCATAACGCGGATATGAATTTGA
ACCGCTACGGAAAGCTCTATGCTCAACAATCMCCCTCTCTTCAAGACTCA
ACAACAGCAGCAGCTCTATATAATCCTCACCAAAATCAATGGTTAGGAGC
TGGGGGGAGTAGCAGTGGAGGAGAAAATATTAGTTCTTTTGGGTTCGCTA
TTGCTGGCGTGAGAGAGCCACACTCCCATCTTCACTCCTATCATCCCTCT
ACTCACCATCCCCATCCTCCACATCACGAATCATGAAGAGTTAGTTTGAA
TTAAAAGTGAGACTTGATGTGCTACTATAGTCAGAGTCGGCTTTACCAGC
TGTGGGGKCTAGGGGAAGCATAAACGTCTGGGCCCGTTTTTTTCTTTATA
ATTTGAATTTAATTTTAAATCCTACGTTGTTTTTATAAATGTTGTATATA
AGATGCAATGTCTGTACGAGTTGCAACTAGTTCAATCAAATTGTACAAGT
TGCAATTCCGTCGTCTTAAAATGCATTATTTAATGACTACAATGTCTATT
TTAATTACCGACTATATATTAATACTGTCATTCCATTTTGATCGTTAAAA
AGACATGGTTATTATGTATTTATAAGTAATACAACTGTGGGCTTTTGAAC
TTTATACTGTAACTCAGAATACTTTTAGTGTTTTAGTAATTTGTATCCAA
ATAGTCAAAAATGACCTCATTCATAAATGGATCATCCATGGAATAATACT
CCATTACTGCATTGTCCTCATCCCAAGAAGTACTTTAAATCCTTCTCATT
TTTTTTATTTTTTTTTTATTTACAACTTGTACAAAATCGTCACTTTTACA
CAATATATATATAAAATAAAACGCAGAGCCCTCTTTATATTGTCAATGGG
ACATTTATGCAGTGGCGGAACTGCACAATTTTCACATGGAGGCCGTGTAT
AAAGTTTAGTGCCCCTAATCCACAGATTTAAAAAAGTGTTTTTTACTTTT
TATTAGAATTTAGAATTCTTTTTTTTAATAATTACTCATTTCATTTGTTG
AATTTCTATCAATTTTTCGAAAAATTGATCACTCCCTCTAACAATTGCCA
TCCAATACAATAATCCTTGCTTGGGAGGGTATGGAACCCGTGACTCCCCT
GCGACTGCATTTGTGTTTATGTTCATTTATAATTCGAAAATATATTTAAT
TATAGAAAAATATGTTTCATATTTTTTTAAACTATTTTCGTCCACCCTAT
TTGTAGCCTCTTGTTTTTATAAGCAGTTCTACCTAAAGCCGGCCCTAGCT
ATAGTTGTTGTTTTGTTAAATTGTAATTCCTATGTATTATAGTTCCAGAA
GAATCACAAAATTTCTCCAAAAAAGTCCTTCATAAGTTTCTAAAAAAACA
TATTGCAAATCTCTATTTAATTCATTTGCATTATTTAATATTCTATCATT
ATTAATCATATCTTTTCATTTTACCACATTATAATTACATTTGTTATATT
ATTGGGTAAACTTATTTTATATATTTGTATTTTTAATAGTAATTTGTATT
GTTATACAATTTTTTGGTTTAAAATGTATTACATATTAAATTTTATATAC
ATATATATTTTTTTTCTTATTATAAAACCATTTTTCATAGTATGTCATTG
ATGATAATATCATTTTT
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