EMLSAT00000007731, EMLSAT00000007731-703578 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007731
Unique NameEMLSAT00000007731-703578
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s44supercontigLSalAtl2s44:717905..719259 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007731 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007731EMLSAG00000007731-690497Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000034110EMLSAE00000034110-743038Lepeophtheirus salmonisexon
EMLSAE00000034111EMLSAE00000034111-743039Lepeophtheirus salmonisexon
EMLSAE00000034112EMLSAE00000034112-743040Lepeophtheirus salmonisexon
EMLSAE00000034113EMLSAE00000034113-743041Lepeophtheirus salmonisexon
EMLSAE00000034114EMLSAE00000034114-743042Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779462auto779462Lepeophtheirus salmonispolypeptide
EMLSAP00000007731EMLSAP00000007731Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007731

>EMLSAP00000007731 ID=EMLSAP00000007731|Name=EMLSAP00000007731|organism=Lepeophtheirus salmonis|type=polypeptide|length=351bp
MSMLFNNMAKWCKSSPCIGVITIISLFGVLYLMLRSKSEFQNETASKMKH
SYCDCYMKPRVFHTTNEDDLTASCAMSGLQGPHQKVISYSFYDDPHTSDK
LNRNFFRGINENLEGIKELFNKYLLPHTIHKEVPFTMRLYFQLHPSSMNK
DKLCKLACNEPLLDICEIKNSNQIFPMLWRFFPIGDTNVDYFFSRDLDSR
ITTREIHALLEFINSKKSLHIMRDHMHHGTQILGGMWGVNLQNKNSRERL
KTGLYNMLKDPIAFSSRTESQHDQTLLKKYIWPLAGXHGLSXDSYFXQTY
KXSIPFPTQRRNGILNFVGAVADINNTIVFTEKNECPYACRPKDHKEWAY
C
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mRNA from alignment at LSalAtl2s44:717905..719259-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007731-703578 ID=EMLSAT00000007731-703578|Name=EMLSAT00000007731|organism=Lepeophtheirus salmonis|type=mRNA|length=1355bp|location=Sequence derived from alignment at LSalAtl2s44:717905..719259- (Lepeophtheirus salmonis)
ATGTCGATGTTGTTCAATAATATGGCGAAATGGTGCAAATCATCCCCTTG
TATTGGTGTGATAACCATCATATCTCTTTTTGGAGTTTTATATCTCATGC
TCAGATCTAAATCCGAATTTCAAAATGAGACTGCTTCAAAAATGAAACAC
TCATACTGTGATTGCTATATGAAACCCAGAGGTATAATACATTTTTTACA
AAATGCATAAATTTTATAATTAATTCATTTATACTAATTATAGTATTTCA
TACTACTAATGAAGATGACTTAACAGCTTCATGCGCAATGTCAGGACTCC
AAGGACCACATCAAAAAGTAATCTCGTATTCTTTCTATGATGATCCTCAT
ACTTCGGACAAATTAAATCGAAATTTTTTTCGTGGAATCAATGAAAATTT
AGAGGGAATTAAGGAACTTTTTAACAAATATTTACTTCCACACACGATTC
ACAAAGAAGTGCCTTTCACCATGAGACTATACTTTCAACTACATCCTTCA
TCCATGTAATTCTTCCTCTGGCCATATTTTTTAATTAATTTTAGCAATTT
AATCGTGACTATTAATAAGTAGAACCTTTCTGTAGCCTTAAGAAATATTA
ATTTTATATAATCTAGGAATAAGGACAAACTCTGTAAATTAGCTTGTAAT
GAACCTCTCTTGGATATCTGTGAAATCAAAAATTCGAACCAAATCTTTCC
TATGCTCTGGAGATTCTTTCCTATTGGAGATACTAATGTGGACTATTTTT
TTTCAAGAGATTTAGACTCTCGTATCACAACCCGCGAAATCCATGCTTTA
CTTGAATTTATTAACTCAAAAAAGGTGTTTTTTTTTTTAAATGTAAGAAT
TGGAGTGAAGCATCTTAGTTGTTCCTTTTTTAATCAAATTAGTCATTACA
CATTATGAGGGATCACATGCACCATGGTACTCAAATCTTGGGTGGAATGT
GGGGTGTTAATTTGCAAAATAAGAACTCACGCGAAAGACTCAAAACAGGT
TTGTACAATATGCTCAAAGATCCAATAGCGTTCTCATCACGAACAGAGTC
GCAACATGACCAAACTCTACTCAAAAAATACATCTGGTAAAATTAATTAT
AATTATTTTTAAAGTCTATCAATAATTGTTATTTTAATCTGTAGGCCACT
GGCGGGYGMACATGGYCTATCCCKTGACAGCTATTTTTMCCAAACGTATA
AAYACTCGATTCCATTTCCAACTCAGCGTCGAAATGGGATTCTAAATTTT
GTTGGAGCAGTAGCGGACATAAACAATACAATAGTGTTTACAGAAAAGAA
TGAATGTCCTTATGCCTGTCGCCCAAAGGATCATAAAGAATGGGCCTATT
GTTGA
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