EMLSAT00000007878, EMLSAT00000007878-703725 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000007878
Unique Name	EMLSAT00000007878-703725
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s463	supercontig	LSalAtl2s463:244081..248812 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000007878 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000007878	EMLSAG00000007878-690644	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000034831	EMLSAE00000034831-743759	Lepeophtheirus salmonis	exon
EMLSAE00000034832	EMLSAE00000034832-743760	Lepeophtheirus salmonis	exon
EMLSAE00000034833	EMLSAE00000034833-743761	Lepeophtheirus salmonis	exon
EMLSAE00000034834	EMLSAE00000034834-743762	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto775180	auto775180	Lepeophtheirus salmonis	polypeptide
EMLSAP00000007878	EMLSAP00000007878	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s463:244081..248812+

protein sequence of EMLSAP00000007878

>EMLSAP00000007878 ID=EMLSAP00000007878|Name=EMLSAP00000007878|organism=Lepeophtheirus salmonis|type=polypeptide|length=306bp
MSNKVIKLLLYIAQLPFCYQLFPLDCNCGRSYAHNGFSGDNSKMLKGDYL
SKNEQPWLXFLDSSFSDGRRIFCSGAIINLKFIITAAHCLKSRNHSLDLV
YVYVGAHNLSNMDKHSRIYRSSSVILHEDYNERTFENDIGLVELPVSLLF
SPSVQPVCLPRHREVQFNQRIATVYGWGDIQHNRALGSLLPKGVNLYITQ
PDEKRSNGSLKRFIAKSEENRVCTLSEGGPLVLKENRKFTLVGVTSLASQ
CEVQNMTGEFARVSQYMGWIIKHAVNGECFRKTSFYSRILTMLLHLNESF
NFDDDR

mRNA from alignment at LSalAtl2s463:244081..248812+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000007878-703725 ID=EMLSAT00000007878-703725|Name=EMLSAT00000007878|organism=Lepeophtheirus salmonis|type=mRNA|length=4732bp|location=Sequence derived from alignment at LSalAtl2s463:244081..248812+ (Lepeophtheirus salmonis)
TAAACATTTATCGTAGCTTGAACAAAACATTTATCAACTTAGTTGATAGG
AAATTAAACTCATTCTAAAGTAATGAGCAACAAGGTCATAAAACTCCTTT
TGTACATAGCTCAACTTCCATTTTGTTATCAGTTATTTCCCTTAGATTGC
AGTAAGTTACAATTCTAATATATTTAAAGGATATAATAATGAAATCCAGG
GATTATGGTGATTTATCTTCATTTAAATAACATGAAACGGTCATTTTTTA
AGATTTGTTTAAAAAACCGAAACTGAGAAGCAGATGTCATCATTGGAAAT
GTATCAGGGAACTCTTGGTGGCGTGAGGACCTTTGTTGACCTTTGAATCA
TGGTATCTCAAGAGAAAATAATCCATCGGATTCAGGTCAAAGGAGCAAGG
AAGTCAAATATCCTCTGACACACAGTTGTAGAATTGCTCATGAAGCAAAT
TCTGGGTCTGAGTCTCCACCAGGGCCTTTCTGAACCTCACAATCCTTGTT
CTGTTGATCCTTGTCATCTTTGAGAACTCATCGTTGTTAATATCAAGATC
TTTGTTCACCAAAATCATCAGAACAGCACACCTGCATTCTGACTATGAAC
ATGTAAAACAAATATACTTCAAATCTTCTGTTGTTTACTCCATAGAAGGT
GATTTGGCTACAAAGTGAAATGTATAGTGAGTGAGTATACTCCATCACAT
ATAAAGCATTGCAAAATTCCGTCATCATATATGGCGGACAAATCCGGAAA
TTTGAGGCCCCGGATTTCGTTGTTATGTACACCCTTTATCTAGTTAAACT
CTAATCCATGCTTAATTTCAGACTGTGGTCGATCATATGCTCATAACGGC
TTTTCAGGAGACAACAGTAAAATGCTTAAAGGTGACTATCTTTCCAAAAA
TGAACAACCATGGCTGKCCTTTCTGGATTCTTCCTTTTCGGATGGAAGGC
GKATTTTTTGTAGCGGAGCGATCATTAATCTCAAGTTCATAATTACGGCG
GCACATTGTTTAAAAAGTAGGAATCACAGTCTCGACTTAGTTTATGTCTA
CGTTGGGGCTCATAACTTGTCAAATATGGATAAACACTCCAGGATATATC
GTAGTAGTTCAGTTATTCTACACGAGGATTACAATGAACGTACTTTTGAG
AATGATATCGGTTTAGTAGAGCTACCCGTATCTCTACTATTTTCTCCTTC
CGTTCAACCAGTTTGTCTTCCTAGGCATAGGGAAGTACAGTTTAACCAGC
GGATTGCCACAGGTTCTAATTCAGAATTGTAACCACCAGATTAATTAAAT
GTGTCTCCATATTTTAGTGTATGGTTGGGGAGATATACAACACAATAGGG
CTCTTGGAAGTTTATTACCGAAAGGAGTAAATTTATATATTACTCAACCA
GATGAAAAAAGATCCAACGGTAGTTTAAAGCGATTTATTGCAAAGTCTGA
AGAAAACAGGGTCTGCACTTTGAGTGAAGGAGGACCTTTGGTCCTCAAAG
AAAACCGAAAATTTACATTGGTTGGAGTTACAAGTCTTGCAAGTCAGTGT
GAAGTACAGAACATGACGGGAGAATTTGCACGTGTCTCTCAGTACATGGG
ATGGATAATAAAACATGCTGTTAATGGGGAATGCTTTCGAAAAACCTCAT
TTTACTCACGGATTCTTACCATGCTCCGTTCCTCCTTAACATAGAATCTA
TAATTTATCATTCCTACATATTTGATACATTTAGATATTATAATATATGT
TTNGTTGTATCAATGTTGACATCTTGTACAAGCCGTAGCTATAGTTGCAA
ATTCTACAATTTGCAACTTTAAAAGAGATTAATAATTTTTAACAAAAGAA
TTGAAGTACGATGATATTATTATTTCAATAATTGACACATGTATATTAAT
ATTAATATTTAGGAAATCACAGATATTTGAGTTAAACATAAATTTTATTT
GTCATACTTATTTTTAAACGAATCTCCAGTCAAATTATTAGAAACTTTAT
TTTATTTACAATTCTAATATTAAATTGGAAATACTACTAAATTTACTCTT
TAAAAAATGTAAATTTTCAAACTTTAGGGACGTTTAGCTACCTTTAAATN
CTTTTCAAACCTGTTCAACCTTTTTAAAANGACGCCATGTCACAGGACTT
AATTCACTGCGGGTACCAGGCCTTCTGTTTCCCCCTGGAAGCCATCATTG
TTAATAAATGTTACTACATTAATTATTATGCGAGCACAGAAGCACATCTA
TGGATAGTATTAGTTTTGTTGTAATCCTACTTTTAATTAATAAATTATAT
TTTGCTGAAGTTAAAAATTCAAAATCTTCAGATTTTAATGGACCACTAGG
TATCTTGAACTCTATGGACCAGTATATCTCAAAGTGTAATAAATGTACTA
AAATATGGAGTGGAATAAAATCCAGATAACAAAATATTTTAAGCAATTAT
TAGCAATATTCTTGAATAAAAAGTGACCCCAAAAAAAAAAAACCTAACTA
TTTTCCCAAACATTTTATTTAAAAAACAAACAACCAAGATATCCATTTCT
ATTTTGGAATTACGGATGAATAGGGGACGAGGAGAAGACGGGAGCCATGC
ATATGGCACTACTAAATAATAATTAGYAAGAATTAATATCAGCGGCCTAT
ATATTATTTGAGGAAGAACATGTATTACTAATATAGAGTGAAGAATCTTT
AACCCTTCTAATAGCATTAATGAAGGTAAAATAGTTTAAAATTTTATTTT
AACATATTATCATGTATAAATTATTTTTTATGCATATCCAAATAAAATAA
AAAATAGCAAAAGCAGGCGAAAATTATTCATTCAGAGGAAGATGTTAACA
CCACGACAATCTTTTATAGAATGAACTAAAAAAGAAAAAAAGAGCACACG
CGCCATACATTTTTCCTCTAATAATATCGAAACATTTATTTTTCTTAACG
CTCCGCCCGACCAGAGGGAAGAAATCCTCAAATGCTATCATAAATGTGTT
TAAAATCAAAATGTTTAAGAAAGTGCTGTTTGAAAATAGAAAACAAAAAC
ATTTAGAAAAAACAGTATAACCTGACGTTCCACAGCGACTATTCATATTT
TGAAGTTGAAAATCCCATTTAGTTTATTTGGATGTTGTTGTTTTTTTATA
CCGAAGTAGAACTTTGTATCAATTTATTATTATTTCATGAATCACACACA
ATCCGCAGGTGAATTACGCCTGAATCACAAAATATAACAAAAACCAAAAA
ACATTCCAATAAAAATTATTTTTATGAATAATTTGGACAATGCACTAATG
TATCTAAATTTTTATAAGATGCTCTGAACTTTTGTGCTAAATCAATTTAT
TTATTTTTGATTAGTGACAATATAAAAAACACACCTTTCGTGATTCGCAA
CATTTGCAATATGCTCACATTCAAATGAAAAATGTATAATTGTTTCCTTT
GATGCCTTAGATAATCAGGAAATTTGTTCTTTATAAGGGTGTTACCTCAC
TAACATACAAACACCCTATATATTTTGTTGTCAGCTATCGATTCCCTCCT
CTCCCTTGATACTTCATGGTTATTTCATAATGCATTCTTTTAAATAAATA
AACAAATTATGAAGTTATTTTATACGTAAACTTCATTTGCCAAAAGAAAA
GGAATCCAATTGCTTGTTGATTCCTCGACAATTAAATAATATATATCGGC
CATTTCATTATTCATATTGATAAACTTTGGCAATCATATAGAAATACAAA
TTTATAACTACACTTTTAATAGAAAGTTATAATTGATATTACAATAGAGT
ATTGAATAAAATACTATGAAGACTTTAATATAACGCAATATATATGTACC
TATATATATACTGTTGTTATGATTGACTTATGTGGCTAATTAGCAGATGA
TTTGGAGGCATTGTTCCCTTATTATCAGAAAAACGGCTGCGCGATAGAAT
AAAGTTAAGGATATGTCATTAGTCTGTCCCTACACACTACCCAGGGAGTA
GGTGTTGGTAACTACTCTCTATTTTGTCCAAAATTGTGATTGACAAGAGT
AGAGAGTTCTCTAAGCCTTTGACTATCTCTTGAACCGAAGCATCGGACCC
AACCCCAGATCTTCTTCTTTCAATTAGATTAATAAAGTGTTGTTTTGCTC
CTATCTCAACTGGTAAGAATGTTATTCTTAGYAGTCCTCCAAAAATTATA
AAAAAAGTTTCTGTATATTTTTCTCGTAGGCTTTAATTTAAATTTATGTG
TGGAGTGTGCATTGATTTGCTTTTATACCACCTTCATAAACAGGCTGTTT
GTATTATATTACAATTGTTTCAAGGCTTAGGAAAGGGTCTATGCATCCCA
CATACACATTTATTGGCTTTTMCTGTMCYCCAWTGTGCTTTTCCCCCCCT
ATCCATAGGATTGCATAACTTCAAATGTAAGCTTCTAGTTACAGCCATAT
ATCATTATCTAATCATTATTTATTGCTAGAAAAACTATATTTCTTAATAT
ATATATATATCTACGTAAATAAATAGGAAAATCGATACTTAATTGATCCG
TAAGTCGATATTCCAAATCCCTCAGCTTTCAGTTCTATACATAAATATAT
ATATCTAAATATCATTTTTTTTTTCATTCTTTGATACATGTCTAAGATAA
TTTTTTTTTTCCCCACAAAATGAGATACGATATTTTTTATTTAGTACATC
TGAATGAGTCATTTAACTTTGATGATGATCGA

Add to Basket

Search form