EMLSAT00000008042, EMLSAT00000008042-703889 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008042
Unique NameEMLSAT00000008042-703889
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s478supercontigLSalAtl2s478:658264..660029 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008042 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008042EMLSAG00000008042-690808Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000035548EMLSAE00000035548-744476Lepeophtheirus salmonisexon
EMLSAE00000035549EMLSAE00000035549-744477Lepeophtheirus salmonisexon
EMLSAE00000035550EMLSAE00000035550-744478Lepeophtheirus salmonisexon
EMLSAE00000035551EMLSAE00000035551-744479Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779165auto779165Lepeophtheirus salmonispolypeptide
EMLSAP00000008042EMLSAP00000008042Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008042

>EMLSAP00000008042 ID=EMLSAP00000008042|Name=EMLSAP00000008042|organism=Lepeophtheirus salmonis|type=polypeptide|length=387bp
MGSSGECRERRRSRSPQRPRKHSNPNRKERDEGRRERSYGTEKKRGKNEM
DTEENLERQKPNFECTGKLLEETNIFNGVIIKYSEPEDARKPKIHWRFYV
FKGEETLPILHLHRQSAFLMGRDRKIADIPIDHPSCSKQHAVFQFRFKGG
EIIPYIIDLESSNGTYLNNQRIDPKRYYELKEKDMRFYLSSCIYFYIHIH
MYTSSDIKSNGYNYTAYYCEENIWRLCEKLIQSGGNLKAIFISNDRKAAP
LWNQRLSDPLRNEGAVLWEYHVIALDGDSRIIYDFDSSIGFKVNFDKYVE
MTFHPEWELDPIFQQKFRVIPAEVYLKTFASDRSHMINENGVWRRPPPPQ
SLISTPESKNNIQQFISMDSEVGWGKVMTLHEFISSV
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mRNA from alignment at LSalAtl2s478:658264..660029-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008042-703889 ID=EMLSAT00000008042-703889|Name=EMLSAT00000008042|organism=Lepeophtheirus salmonis|type=mRNA|length=1766bp|location=Sequence derived from alignment at LSalAtl2s478:658264..660029- (Lepeophtheirus salmonis)
ATGGGATCTTCTGGTGAATGTAGAGAAAGGAGACGTTCTCGATCTCCACA GCGACCCCGGAAACATAGTAATCCGAATCGGAAGGAAAGGGACGAAGGGC GAAGGGAAAGGAGTTATGGGACGGAGAAGAAGAGGGGCAAGAATGAAATG GACACGGAGGAGAATCTGGAGAGGCAAAAGCCGAATTTCGAGTGCACTGG GAAATTGCTGGAGGAGACAAACATCTTCAATGGCGTGATCATCAAATACA GCGAACCCGAAGATGCGAGGAAACCTAAAATACACTGGCGATTCTACGTG TTCAAGGGTGAGTTCGCCTCAAAAGACATTCCATGCCTAATGTACTCATT CTTTCTGTCTGTCTCTTATTTCATTAGGTGAGGAAACTTTGCCGATTCTG CATCTCCACAGACAATCTGCATTCCTCATGGGCAGAGACCGCAAAATTGC GGATATCCCCATCGATCACCCCTCCTGCTCCAAGCAACACGCTGTCTTTC AGTTTCGCTTCAAAGGAGGAGAAATCATTCCCTACATCATCGACCTGGAG TCCTCCAATGGAACTTACCTCAATAACCAAAGGATAGATCCAAAACGATA CTATGAACTCAAAGAAAAAGACATGGTTAAATTTGGTTTTAGCAGCAGGG AATATGTTCTCTTGCACGACGAAAGCACGGATTAAATTGTAAAAACGAAT CTTTCTTCTTCTTTTTTTTCCTTTGCCTCTTAGTCCTAGAACCCAAATTT TTGCACTTTTTGATGCCTATCTCTTAAGAGCAAAACCTTTTATATATATT TATACATATATGAATACCTCGTCTTTGTAATTTATATCATTTATTTAGGG AAACAAAACAAAAAACATGTATTTGAGTACACATTCGAAAAGAAAAAATT TGTGTCCTACTTAATTTACATATAATTGTCCTTTTTAAATGTGTACATGT ACGCCCCCTATTTAAAGTCGAGCCGAAAGCTATATATTTTAATAATTCTC GTAAAAAATGCACTAAAAAAGAAACCTTAAATAATATTTTTTTCTTCCAA ATCGCATATATTTCTTCAAATCCATTTCTCAGAGACATAGCGATTTTACC TTTCATCCTGTATTTACTTTTATATTCATATACATATGTATACCTCTAGT GATATCAAATCAAATGGCTACAATTATACGGCCTATTACTGTGAGGAGAA CATTTGGCGATTGTGTGAAAAACTTATACAATCCGGTGGAAACTTAAAAG CAATCTTTATCTCCAATGATCGTAAAGCAGCCCCACTTTGGAATCAAAGG TTGAGCGATCCTCTTAGAAATGAAGGAGCAGTTCTATGGGAATACCATGT CATCGCCCTTGATGGGGACTCTCGAATTATTTATGACTTCGACTCATCCA TCGGTTTTAAAGTTAATTTTGATAAATATGTTGAAATGACTTTTCATCCT GAATGGGTAAATTTCAAACCTTACTCCTTTTCCCTTTATTTTACTTTCGA CTTTTAACGTGTAATTATTATAGGAGTTGGATCCCATATTTCAGCAAAAA TTCCGTGTTATTCCTGCTGAAGTCTACCTCAAAACTTTTGCTTCTGATAG GAGTCATATGATAAATGAGAATGGAGTCTGGCGTAGACCACCCCCTCCTC AGTCTCTAATATCAACTCCTGAATCTAAGAACAATATACAACAATTCATC TCTATGGATTCTGAAGTTGGTTGGGGAAAGGTGATGACCCTTCATGAGTT TATAAGCTCAGTTTGA
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