EMLSAT00000008626, EMLSAT00000008626-704473 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000008626
Unique Name	EMLSAT00000008626-704473
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s530	supercontig	LSalAtl2s530:811128..816266 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000008626 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000008626	EMLSAG00000008626-691392	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000038272	EMLSAE00000038272-747200	Lepeophtheirus salmonis	exon
EMLSAE00000038273	EMLSAE00000038273-747201	Lepeophtheirus salmonis	exon
EMLSAE00000038274	EMLSAE00000038274-747202	Lepeophtheirus salmonis	exon
EMLSAE00000038275	EMLSAE00000038275-747203	Lepeophtheirus salmonis	exon
EMLSAE00000038276	EMLSAE00000038276-747204	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto779801	auto779801	Lepeophtheirus salmonis	polypeptide
EMLSAP00000008626	EMLSAP00000008626	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s530:811128..816266+

protein sequence of EMLSAP00000008626

>EMLSAP00000008626 ID=EMLSAP00000008626|Name=EMLSAP00000008626|organism=Lepeophtheirus salmonis|type=polypeptide|length=114bp
MAKRVEHLENKLKIEKNNTFEHNKEVESLKNKVSGELGGIVMNWNSILFA
KSKELLKKFGISKREIDVMVVRAMSDSFKVWAADRERLDHLYSIFIVTRS
ISSLSSTEFMELIC

mRNA from alignment at LSalAtl2s530:811128..816266+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000008626-704473 ID=EMLSAT00000008626-704473|Name=EMLSAT00000008626|organism=Lepeophtheirus salmonis|type=mRNA|length=5139bp|location=Sequence derived from alignment at LSalAtl2s530:811128..816266+ (Lepeophtheirus salmonis)
TGCACTTCCAGATAGTATTAGAACTCATTTATCAGTTGTTAGGGTATAAG
TAGCAGGCGAAATGGTATTTTAAGTAACTCTTTCATTTTTGGGTTTGTAC
AAGATTATGTTGTAAGCTTTATTCAAATAATCTGAATTATTATGATTATA
TTCTTCATTGAATAATAATGTAATTAGTTAATAACGATGACTAAGTACTG
TATCGCGTTGAATCAAATTAAGGAAAATGCCGGGTTGCTCAGCGTACAAA
TGCAAATCTAGAATAGGGGATAAAAAGGTCCGAAAAATTAAGCTTACATA
AGTTCCCAAGAGGATGAGCTCCTTAAAGGGTAAATCCAATATTTATTACC
TGGTTAAATATACATCTTGTCATTTGATTAAGTGAGTGGATTCAAAATAC
AGGGAATTATATCCTTGGCAAATACACTGGAATGCTGACGTCACTATGAA
AAGAGTTATCTAGAACTCCCTGTTCAAAAATACCTCGTCTGAAAAGCAAC
CCCATTCCTACAATTTTCCTAGAGATACCAAATTTTTTAAGAAATTCTCT
AAAAGGGGTTGCGGCCTTTTTCAACAATACAAAGGTAATTCTTTTAATAT
GCTAATTTGAATTTAAACATAAAATTTAATATCAATTTACAATAATGCTC
TTAATAACATTGAAATATTGAGATTATAATTTATAATCTACAATAGATAA
TAACTTTTATTTGTATAATCAATTGCTAGGTCTGACGAATGGGAGAAAAA
ATGGCCGAAATAAAATGTAAGAGGCAAGATGAAAAAATAAGGCAACAAGA
ATTACTTAAAAAACCCTCAACGAAACGTCCTCCTTGATCATTGTTATTTT
TTAGTGGATAACCGGGCACTCAAAATAAAATTCCTGCTAATGGCAAAAAG
AGTGGAGCACTTAGAGAACAAATTAAAAATCGAAAAAAACAATACTTTTG
AACATAACAAAGAGGTTGAATCCCTGAAGGTAAATATATATATTATCATA
CTTAACATATATTAGTTTTAAATAAGTTATTAAATATTCTGAGCAAGGAG
ACTTCTTACCAAACGATTCCATAAACAGAGGTATGAATACAGAACCTCTT
GCTCTTTTGATATCAAGGCATGATTATAAAATTAAAGAATTGCTATACTG
CTTAGCTCTGAAAATATTAGTTATTGAAGCTTAAACAAACCCTGTTTTTA
TATCTTAGGAAGTGAATGATGACTTAAAAAAATAGCAAGGAACTGAAGAA
ATTCTGCAATAATTTAATGAAACAGTGATTTCAAATCTACTTTTCCGTTG
CAGTGAAATTAATCAAATGTACAACCATCGTAGTAGAGAAGCTTACTCAC
TTGAATTACGTAAATTTGCAACAACTCTTCCATTTTATAGTGCGAAAAAC
ATGGAAGTTTAAGAAAAACATTTCATTTTGCTTACTATCACAATCGACCT
TACGCAGCTGGTATTCAACTATTGATTGCACTCCTGGTTTCACTGATGAA
TTTCTTAAAGCTAAATCTCAAAAAGAAAAAAATAATCTGCACACTTATGT
AAGATGAAATGGCTTTAAAAAGGTCTTGAGTTTGACAGTACACGGTATCA
TGGTTATGTGGACTTTGGCAGAGATCAATCTACAGACTCTATTGCTCAAA
ATGCCCTAGTTTTCATGGTATCTAGTATCAATGATAGGTTCAAATTATCA
GCCCATCACCTAATTTAACCATGATTAAAAATTCGGAGCAAATTTAGAAT
TGTATTATTTACGACCATGGTTTTTAATTCAGCAGCTCCGGATAGCATAA
TATATGTAATTCTTGATTGTTCTCACATGGTAAAATTATTCAGGAATAGT
TTGGCTTCATGTAAAATTATTTATGATAATAACGGTGATAAAATTGAATG
GAGATTCATTGCCGAATTACAAAAATTACAAGGTGAAGAAGGCCTTAAAT
ATGGAAACAAATTAACCAAGAGGCATGTTAACTTTTGCAGGATGAAGATG
AAAGCTTCTTATGCTACACAAACTCTTAGCTAGTCAGTAGCGAATGCAAT
CGAGTTTCTCATCAAAGATTTAAATTGCCTTCAATTTAAAGGATTAGAAA
ACACGGTTAATTTTATAAGAATTATGAATCGTTTTTTCGATAGTTGCAAT
AGTAGAATTTGTTTTGGAAGAGGCTTTAAGGCTCCAATGAAATGTTTTGG
AAACCATTTGTTGAAGATAGCTTCAATCATATCAAAGATTTAAAAATTGA
TCCTTCGACTTTACTATACAAATTAAGGGAAAAGACAGGCTTCATTTGTT
TTTGTGTGGCTATAAAGTCAATTTATAATATATTTGATACATCAGCATGT
CAAGTCCAATGACCAAAAGTATCTTCTAATGTATCCTCTGATGTCACTAG
ATTACCTAGAACTCTTTTTTGTTTGTTCTTTACGTTTTAGATTGGGACTA
AACAATAACACAACAGCACGTCAATTTGTGTTAGTTAATAATAGTTTAAT
GAATTGTTATAAATTTTTCTTTAAAATCATATTCTTTTTAATTACAGGCA
AGTTATAAAAGGCTCCTTGTTCACCAAGAAGTAAAAGAAAGCTTCTTCCA
TCATTAAGTTTTTCAAAATTAAAGATTGTGAACCTTTTTGATTTCTGGTG
TGTGAATTTTCTGGCGAAGATCGAGATCTCATCGAAACTTATCAAGATAG
TGTTAATAGGGCTTCAGATTTATTATTATATTTAAATACATTACATGCTA
GTCAGCTTTACAATATGATATTCTCAGCGAACAAACTCGATAAATTTTAT
TGACGTCGACAAATCCAAGACGATGCTTTACAATGCTATTTGCCAATTTA
TTTGAAACAGGAGATTCCTATCGTCCTATTGGGGTGAAGTGTTAAAAAAC
AACGTCATTTTCATAATTATATTGCTTATGTTGGATTTAAATATTTTAAT
ATATCTAGCAAAAATCTCATAAATYAYGCTAATAGTAGCATACACTCTGG
TAAAAAAAGGTCGAATTCTCATGGTGCAAGNTTTCAGAAAAATTACTAAA
TTATCTTCTAAATTTTGAACTTCCATTTTATTTCGTTAAATATAGGATTT
AATCTAAAAAAATAGTTTTATTCAGATCTTAAAATAATAATACATTTTCA
TAATAATATAGCTATAAATCAAAGAAAAGCAGGATAAAGTATAAATAGTT
AGCTTGAATTTTGAACGTCTGTATTAATGATGATTATATTATATTATCTG
TATTAATGCCATGAATGATTATTTTTAAAATCAATAATAATTCAATATAA
GAACTGTTATGTGAAACACTTATTAATAATCTTCATTAGTTTGGAGATTC
TAAATTTTTTATGGAGGTAATATTCCAATATAGTGATAAGCAATTAAGTT
TTTTTTTCAAGATGATTAAGACTATCTAAGTTTCAAAATTACAAGTCTAC
AGAAGTTAAGAGGTCACTTATAATTGTTTATTACATTATCACTTAGGACT
CAATAATTCACAAAATCTATTTATACAGATAGTAGCAAAATATAATATAT
ATTGCAGACAAAAGTATCGATAAAAAAGGGTGCATATTCATTGAGAGTCT
AAGATTGATATCTACTTTTTCCAATGAATTTGTGCATTATATACATCACG
GAAACTGAAGGATTCTTAACAATGAAATATTTTTCTCAGAATAAGAGACG
AAAGAAAAAAAAAGTCGACTTTGGAAGGAAAAGGATTCAAGAGTTTCAAC
GAAGGAACTGTGGATGAGAAATGAAACTCTTAGTTCCTCACTGGGTAATT
CATTCGGAAATATGCATTGTAGACCAAAATATCGAGGAAAATGAAGTACA
TTATCTTTACGAGTCTAGAATTATCTTGCACTTGTTTTCCAATGACAAAA
GAGACACAGTAGTAATAAAGAAATCAAGGGTGAGATTGAAGTGTCCAGGT
TTTATAATTATCCGTATAGACTGTATATAAAAAACTTATATTAGAATTGA
TATAAATGTGATAGATGAGTAATTTCTGCATTATATACATCAGGGACACT
GAAGGACTCTCAGTGGAAATTGTAATCAGAAAGTATGTCCGTAAAATAAC
GGGCCTGTTCCAAGGGGAATCACAACAATCTCCAAGACAATACATTGATT
ACAGAAATATACAGGGCTTTGTAAATCATGGCAAACAACGGGGGCATACA
AGTCTAAATTTAATCTATATAAGGTAATTCCTAAGAATAATAAATATGAA
AGCTGTGGTAACAGGGTTAAAAATCTTGACTATATCCTGCAAACATGCCT
ACGTGTACAAGGCTTCCGCATAGAGAGACATGATAAATTAGTTGACTACT
TGGACTTGAAGTTKCGCCAGCCAGGAGTGCAGGTTTTTAAGAACCAAGTG
TACAAAATAGGGGAGACGGCATTAAAACTAGATCTTGTATTAGTACAAGA
AGGGAATGTCCACATCTTGGACCCAACAATTGTTGGGAAAACAACTGGTT
TAGTCTCGGCCAATAGTTTAAAAAGGAAAAAGTATTTGTGAAATGATTTA
CTGGAATCTATTAAGTTAAAATACTCTTTGGAGAATAAAGTGAGTGGCGA
ATTAGGAGGGATTGTTATGAATTGGAATTCAATCCTATTTGCCAAATCGA
AAGAGCTACTTAAGAAATTTGGCATATCTAAAAGGGAAATTGATGTCATG
GTAGTCAGGGCCATGAGTGACTCATTTAAGGTTTGGGCAGCGGATCGTGA
AAGACTGGACCATCTATACAGGTTTTAACCCCTCCTAAATAAGTTTTGGT
TTTTGTAGGTTGTAAATGATATTTTGCTTTTACATAGTTGTATTATATAT
TATATTATAAACATTATAAGTTTATAGTTCAACATTGGAATAACTAGATT
TTTCCCTTGTTGGTCCTTATGGGCATTGGGATTAACTATGTTGTTTTCTC
TGGTGTGGCATCGGGCTAGAATTAGATAGATTTGTGGATATTAGTTGAGA
TGCAAAATTATCGTTCTTTTGATTGTTTTTCGTTTGGTTTACCCTCTAAT
TTGATTAATTTTATATTTAATTAAGTATTTTCATTGTGACTAGATCCATT
TCTAGCCTTTCTTCTACTGAATTTATGGAATTGATTTGC

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